| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is pfkA
Identifier: 238921652
GI number: 238921652
Start: 3689310
End: 3690272
Strand: Reverse
Name: pfkA
Synonym: NT01EI_3808
Alternate gene names: 238921652
Gene position: 3690272-3689310 (Counterclockwise)
Preceding gene: 238921653
Following gene: 238921649
Centisome position: 96.8
GC content: 56.07
Gene sequence:
>963_bases ATGATCAAAAAAATCGGTGTTTTGACCAGTGGCGGTGATGCGCCGGGCATGAACGCAGCCATCCGCGGCGTTGTGCGTGC GGCCCTGTCCAAAGGGTTAGATGTTTACGGCATTCATGATGGCTACCTCGGTCTGTATGAAGGACGCATTGAGCAACTGG ATCGCCATAGTGTTTCCGACGTGATCAACCGCGGCGGCACTTTCCTGGGCTCAGCCCGTTTCCCGGAGTTTCGCGACGAG AAAGTTCGTGAAAAGGCCGTAGAGAATATGCGTGAGTTTGGCCTGGATGCGCTGGTGGTGATCGGCGGCGACGGTTCTTA TCTGGGCGCCAAGCGCCTGACCGAGATGGGATTCCCCTGCATTGGCCTACCGGGGACTATCGATAACGATGTGGCCGGCA CCGATTACACTATCGGGTATTTTACGGCGCTGGAAACCGTTGTGGAGGCCATTGATCGTCTGCGTGATACCTCCTCTTCA CACCAGCGTATCTCCATCGTTGAGGTGATGGGGCGCTACTGCGGCGATCTGACGCTGGCGGCGGCGATTGCCGGTGGCTG CGAATATATCGTGCTGCCGGAGGTGGAGTTCAAGCGCGAAGATCTGGTCGAAGAGATTAAGGTCGGTATCACTAAAGGCA AGAAACACGCTATCGTTGCTATCACCGAGCATATCTGTGACGTGGATGAGCTGGCCAAGTTTATCGAACAGGAGACCGGC CGTGAGACTCGTTCGACCGTTCTGGGACATATCCAGCGCGGTGGTGCGCCGGTGGCCTATGACCGTATTCTGGCGTCCCG TATGGGAGCCTACTCCATCGAGCTGCTGCTGCAGGGATACGGCGGTCGCTGCGTGGGGATCCAGAACGAAAAGCTGGTAC ATCACGACATCATCGATGCGGTTGAAAATATGAAGCGTCCATTTAAGGGCGATTGGCTGGATACTGCCAAGATGCTGTTC TAA
Upstream 100 bases:
>100_bases TGGGTGTCACGTCGACCGTCGCCGTTTCCGACGGCCGGGGCTTGGGTTGTACGCGCCAAGCCATTCCTAAGAAATAGTAT CCACAAGCTCAGAGGTAGTC
Downstream 100 bases:
>100_bases TGGCGCTTGTGCTACCGTAACTATCAGAATATAAAGAAAGTCTGATAGATAAGGACATCAAGGGAAAAGTTGGCTTCAGG ATATTTTAGCAGAGGCTAAT
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MIKKIGVLTSGGDAPGMNAAIRGVVRAALSKGLDVYGIHDGYLGLYEGRIEQLDRHSVSDVINRGGTFLGSARFPEFRDE KVREKAVENMREFGLDALVVIGGDGSYLGAKRLTEMGFPCIGLPGTIDNDVAGTDYTIGYFTALETVVEAIDRLRDTSSS HQRISIVEVMGRYCGDLTLAAAIAGGCEYIVLPEVEFKREDLVEEIKVGITKGKKHAIVAITEHICDVDELAKFIEQETG RETRSTVLGHIQRGGAPVAYDRILASRMGAYSIELLLQGYGGRCVGIQNEKLVHHDIIDAVENMKRPFKGDWLDTAKMLF
Sequences:
>Translated_320_residues MIKKIGVLTSGGDAPGMNAAIRGVVRAALSKGLDVYGIHDGYLGLYEGRIEQLDRHSVSDVINRGGTFLGSARFPEFRDE KVREKAVENMREFGLDALVVIGGDGSYLGAKRLTEMGFPCIGLPGTIDNDVAGTDYTIGYFTALETVVEAIDRLRDTSSS HQRISIVEVMGRYCGDLTLAAAIAGGCEYIVLPEVEFKREDLVEEIKVGITKGKKHAIVAITEHICDVDELAKFIEQETG RETRSTVLGHIQRGGAPVAYDRILASRMGAYSIELLLQGYGGRCVGIQNEKLVHHDIIDAVENMKRPFKGDWLDTAKMLF >Mature_320_residues MIKKIGVLTSGGDAPGMNAAIRGVVRAALSKGLDVYGIHDGYLGLYEGRIEQLDRHSVSDVINRGGTFLGSARFPEFRDE KVREKAVENMREFGLDALVVIGGDGSYLGAKRLTEMGFPCIGLPGTIDNDVAGTDYTIGYFTALETVVEAIDRLRDTSSS HQRISIVEVMGRYCGDLTLAAAIAGGCEYIVLPEVEFKREDLVEEIKVGITKGKKHAIVAITEHICDVDELAKFIEQETG RETRSTVLGHIQRGGAPVAYDRILASRMGAYSIELLLQGYGGRCVGIQNEKLVHHDIIDAVENMKRPFKGDWLDTAKMLF
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family
Homologues:
Organism=Homo sapiens, GI11321601, Length=312, Percent_Identity=40.0641025641026, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI266453768, Length=312, Percent_Identity=39.1025641025641, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI266453748, Length=312, Percent_Identity=39.1025641025641, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI4505749, Length=312, Percent_Identity=39.1025641025641, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI266453619, Length=312, Percent_Identity=39.1025641025641, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI48762920, Length=313, Percent_Identity=40.5750798722045, Blast_Score=202, Evalue=4e-52, Organism=Escherichia coli, GI1790350, Length=320, Percent_Identity=84.6875, Blast_Score=568, Evalue=1e-163, Organism=Caenorhabditis elegans, GI25147584, Length=359, Percent_Identity=36.4902506963788, Blast_Score=201, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17558788, Length=308, Percent_Identity=38.6363636363636, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI72003601, Length=291, Percent_Identity=30.9278350515464, Blast_Score=149, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6321679, Length=342, Percent_Identity=37.4269005847953, Blast_Score=205, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6323861, Length=344, Percent_Identity=35.1744186046512, Blast_Score=186, Evalue=6e-48, Organism=Drosophila melanogaster, GI28573326, Length=359, Percent_Identity=37.6044568245125, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24652337, Length=358, Percent_Identity=36.8715083798883, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI17647809, Length=312, Percent_Identity=40.0641025641026, Blast_Score=207, Evalue=9e-54,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): K6PF_EDWI9 (C5BC26)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002935167.1 - ProteinModelPortal: C5BC26 - GeneID: 7959316 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3808 - OMA: VDAIENM - ProtClustDB: CLSK2813739 - GO: GO:0006096 - HAMAP: MF_00339 - InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 - PIRSF: PIRSF000532 - PRINTS: PR00476 - TIGRFAMs: TIGR02482
Pfam domain/function: PF00365 PFK; SSF53784 Ppfruckinase
EC number: =2.7.1.11
Molecular weight: Translated: 34954; Mature: 34954
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: ACT_SITE 128-128 BINDING 163-163 BINDING 244-244 BINDING 250-250 BINDING 253-253
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKIGVLTSGGDAPGMNAAIRGVVRAALSKGLDVYGIHDGYLGLYEGRIEQLDRHSVSD CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHH VINRGGTFLGSARFPEFRDEKVREKAVENMREFGLDALVVIGGDGSYLGAKRLTEMGFPC HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCC IGLPGTIDNDVAGTDYTIGYFTALETVVEAIDRLRDTSSSHQRISIVEVMGRYCGDLTLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AAIAGGCEYIVLPEVEFKREDLVEEIKVGITKGKKHAIVAITEHICDVDELAKFIEQETG HHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHCC RETRSTVLGHIQRGGAPVAYDRILASRMGAYSIELLLQGYGGRCVGIQNEKLVHHDIIDA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEEEHHEECCCCEEEECCCCCHHHHHHHHH VENMKRPFKGDWLDTAKMLF HHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure MIKKIGVLTSGGDAPGMNAAIRGVVRAALSKGLDVYGIHDGYLGLYEGRIEQLDRHSVSD CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHH VINRGGTFLGSARFPEFRDEKVREKAVENMREFGLDALVVIGGDGSYLGAKRLTEMGFPC HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCC IGLPGTIDNDVAGTDYTIGYFTALETVVEAIDRLRDTSSSHQRISIVEVMGRYCGDLTLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AAIAGGCEYIVLPEVEFKREDLVEEIKVGITKGKKHAIVAITEHICDVDELAKFIEQETG HHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHCC RETRSTVLGHIQRGGAPVAYDRILASRMGAYSIELLLQGYGGRCVGIQNEKLVHHDIIDA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEEEHHEECCCCEEEECCCCCHHHHHHHHH VENMKRPFKGDWLDTAKMLF HHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA