| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921627
Identifier: 238921627
GI number: 238921627
Start: 3665209
End: 3665460
Strand: Reverse
Name: 238921627
Synonym: NT01EI_3782
Alternate gene names: NA
Gene position: 3665460-3665209 (Counterclockwise)
Preceding gene: 238921628
Following gene: 238921626
Centisome position: 96.15
GC content: 56.75
Gene sequence:
>252_bases GTGTATGAAAGCGGGATCGGCGTCTCCCGCCCGGGAACACCGGCAGACAACGCGACGGTGGGATCCTTCAACGGCAGGTT AAGGCAGGCGGGTCTGAATGAAAACGGGTTCATCTCTCTGGTGGATGAACGGTGCAAAATCGAGGCCTGGCGCATACACG ATAACCAGCGTCGTCCCCATTGTGAACCGGGCTGGATACCCTCAGCGTTTGCTGAAAAATCGGCTGGTTGCCAGAATATG CAGCCAGAATGA
Upstream 100 bases:
>100_bases GGCCGGGATGCTGGATAGCATAGCGCACAGGCGTCCTTTACCGCAGGTGCTGAAAGCCGATAATGGCTCTGAATTTGCAG GGAACATATTGGATAGGTGG
Downstream 100 bases:
>100_bases GGCCGGTTATTCCTGATTATGAGTAGACCACATACGGGGAGCGGGTCATGTTGATGAAATGGTCGTCTCTCTGAGGCACA ATATGTAGGGGGCGACTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; ISRSO16-Transposase ORFB Protein; Integrase Catalytic Subunit; Cache Type 2 Domain-Containing Protein; Transposase Of
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MYESGIGVSRPGTPADNATVGSFNGRLRQAGLNENGFISLVDERCKIEAWRIHDNQRRPHCEPGWIPSAFAEKSAGCQNM QPE
Sequences:
>Translated_83_residues MYESGIGVSRPGTPADNATVGSFNGRLRQAGLNENGFISLVDERCKIEAWRIHDNQRRPHCEPGWIPSAFAEKSAGCQNM QPE >Mature_83_residues MYESGIGVSRPGTPADNATVGSFNGRLRQAGLNENGFISLVDERCKIEAWRIHDNQRRPHCEPGWIPSAFAEKSAGCQNM QPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9158; Mature: 9158
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYESGIGVSRPGTPADNATVGSFNGRLRQAGLNENGFISLVDERCKIEAWRIHDNQRRPH CCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC CEPGWIPSAFAEKSAGCQNMQPE CCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MYESGIGVSRPGTPADNATVGSFNGRLRQAGLNENGFISLVDERCKIEAWRIHDNQRRPH CCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC CEPGWIPSAFAEKSAGCQNMQPE CCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA