| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921625
Identifier: 238921625
GI number: 238921625
Start: 3663361
End: 3663507
Strand: Direct
Name: 238921625
Synonym: NT01EI_3780
Alternate gene names: NA
Gene position: 3663361-3663507 (Clockwise)
Preceding gene: 238921613
Following gene: 238921629
Centisome position: 96.09
GC content: 44.9
Gene sequence:
>147_bases ATGAGATATATTGTCTTATTGCTTGCAACACTGATATTAAGCGGCTGCGCACATACCCCAGCAGTACAGAATCATAACGT CGGCAACCTGGCCGACTGTAGCATGTGTTCCTACAACGACACCTTCTACACCGATTTTGATGAGTAA
Upstream 100 bases:
>100_bases CACGCTATAATCGACAACAAATAATATAGGGAATTTAAATGCTCACGATGAGCAGGGCATTTTACGCTAGAAATACCTAA TGGGTTAATAGGAGTCCATC
Downstream 100 bases:
>100_bases TGTCTGCAGGGCAACGATGGCCGGGGCCCCTGCGCAAAAACTGCCGCGCCTCATGGTAAACACGCCGAGCAATCGCAGAT ACGGCCGCATTCGTCCGATG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MRYIVLLLATLILSGCAHTPAVQNHNVGNLADCSMCSYNDTFYTDFDE
Sequences:
>Translated_48_residues MRYIVLLLATLILSGCAHTPAVQNHNVGNLADCSMCSYNDTFYTDFDE >Mature_48_residues MRYIVLLLATLILSGCAHTPAVQNHNVGNLADCSMCSYNDTFYTDFDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5342; Mature: 5342
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYIVLLLATLILSGCAHTPAVQNHNVGNLADCSMCSYNDTFYTDFDE CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure MRYIVLLLATLILSGCAHTPAVQNHNVGNLADCSMCSYNDTFYTDFDE CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA