| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921602
Identifier: 238921602
GI number: 238921602
Start: 3642955
End: 3643149
Strand: Reverse
Name: 238921602
Synonym: NT01EI_3755
Alternate gene names: NA
Gene position: 3643149-3642955 (Counterclockwise)
Preceding gene: 238921603
Following gene: 238921601
Centisome position: 95.56
GC content: 63.59
Gene sequence:
>195_bases GTGATCCCGGCGCGTATTCGCATGCTGTTGTGTCTGGGGGATATCGTCGTTGCAAACCAGCTTATCAGGACGTCGTGCAG TCCGGCACCGGATGCCGCCGTGTGCCAAACGGTGTGGATGCCGGTGATGCTGAGTACGCCGGAGAGAGACCAGGCGCTGC AGCAGGCGCGCCTGTTGGCGTCCGGAGGCCAGTAG
Upstream 100 bases:
>100_bases GCGTTGAGTACGCCAGTGAGGTGCGGGTATGCATAGGCGAATCCGCGCAGCGTTATGATCTGGTAACGCAGTTGCTCGAC CGTTTGATGATGATCCTGAA
Downstream 100 bases:
>100_bases GCGGCAGCCGTTGCAGTCTATGCACGGCATGTCGCTCCCGCGGGTGTTTGGTGTTTGCGCCAGAGTACTGACGTACGGTT GCTCATCTGCCGGGGTAGGT
Product: cellulose synthase operon protein C
Products: NA
Alternate protein names: Cellulose Synthase Operon C Domain Protein
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MIPARIRMLLCLGDIVVANQLIRTSCSPAPDAAVCQTVWMPVMLSTPERDQALQQARLLASGGQ
Sequences:
>Translated_64_residues MIPARIRMLLCLGDIVVANQLIRTSCSPAPDAAVCQTVWMPVMLSTPERDQALQQARLLASGGQ >Mature_64_residues MIPARIRMLLCLGDIVVANQLIRTSCSPAPDAAVCQTVWMPVMLSTPERDQALQQARLLASGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6907; Mature: 6907
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00615 C_TYPE_LECTIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPARIRMLLCLGDIVVANQLIRTSCSPAPDAAVCQTVWMPVMLSTPERDQALQQARLLA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SGGQ CCCC >Mature Secondary Structure MIPARIRMLLCLGDIVVANQLIRTSCSPAPDAAVCQTVWMPVMLSTPERDQALQQARLLA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SGGQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA