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The map label for this gene is cdh [H]

Identifier: 238921593

GI number: 238921593

Start: 3633434

End: 3634207

Strand: Direct

Name: cdh [H]

Synonym: NT01EI_3747

Alternate gene names: 238921593

Gene position: 3633434-3634207 (Clockwise)

Preceding gene: 238921591

Following gene: 238921595

Centisome position: 95.31

GC content: 63.57

Gene sequence:

>774_bases
ATGCAGATCCGTCACCGCTATACCTATGGCCTTGCGGCAACGCTGCTGCTGCTGGCTGCCGCCGTCACGCTGTTGCTGTA
TCATCCGCAGAGCGATGCGCTGTGGCGCATTGTCAGCCAGCAGTGTCTCCCCCACCAGCAGGCAAGCGGCGATCCCGCAC
CCTGCGCCTATCTGGACCGCAGCCAGGGCTACGCCCTGTTCAAGGATCGTCGGGGGGCGCTGCAGTACCTGCTGCTGCCC
ACCGTCCGTAGCAGCGGCATCGACGATCCGCAGCTGCTCAACCCGGCGACGCCCAACTATATGGCGCTGGCGTGGTATAG
CCGCCCGCTGTTAAGCCAGCGCTACGGCCAACCGATAGCCGATAGCCGGCTCTCGCTGACCATCAACTCGCGCGCGGGAC
GTACCCAGGATCAGCTGCATATTCATCTCTCCTGCACCCGTCAGGCGGTCGTCTCCCAACTGTGGAAAATCTATCCCACG
CTCGGAACGCAGTGGCAGGCAGTCAGCAATGGGATCAATGGTCACCCCTACTGGGCAAGACGATTGAGCAATGAAACGCT
GGCGCGGGAAAGTCCTTTTATTCTGCTCTCCCGCTTAAACGGGGCGCATGATGATATGGCGGCCTATGGGCTGGCGCTGC
TGCCGGCGCCGGACGGTCAGCTGATCCTGCTGGCGACCCGCCGGGCGCTGTGGCGCGGCAGTCTGGCCTCGATTGAGGAG
ATTCAGGACCATCGCTGCCCGCAGCTGTATCCCTCGCCGCCGCACACCGACTAG

Upstream 100 bases:

>100_bases
AGGATAAATAAAATATTTATCCTCACCATGAACTCAGGTGCCAAGTGGCCACTATCGGGCGATAGTCCATTATTTTACAC
CTCTGTAAACAGGTATCATC

Downstream 100 bases:

>100_bases
CCGGCGAAACGCTGAGGTAATAGGGGAAGACGTTCAAACTGGAGCGGTCGTGACAGGTAGTAGCCCTGGGCCGCACAGGC
GTCCGAGCGTTGCACCAGCT

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MQIRHRYTYGLAATLLLLAAAVTLLLYHPQSDALWRIVSQQCLPHQQASGDPAPCAYLDRSQGYALFKDRRGALQYLLLP
TVRSSGIDDPQLLNPATPNYMALAWYSRPLLSQRYGQPIADSRLSLTINSRAGRTQDQLHIHLSCTRQAVVSQLWKIYPT
LGTQWQAVSNGINGHPYWARRLSNETLARESPFILLSRLNGAHDDMAAYGLALLPAPDGQLILLATRRALWRGSLASIEE
IQDHRCPQLYPSPPHTD

Sequences:

>Translated_257_residues
MQIRHRYTYGLAATLLLLAAAVTLLLYHPQSDALWRIVSQQCLPHQQASGDPAPCAYLDRSQGYALFKDRRGALQYLLLP
TVRSSGIDDPQLLNPATPNYMALAWYSRPLLSQRYGQPIADSRLSLTINSRAGRTQDQLHIHLSCTRQAVVSQLWKIYPT
LGTQWQAVSNGINGHPYWARRLSNETLARESPFILLSRLNGAHDDMAAYGLALLPAPDGQLILLATRRALWRGSLASIEE
IQDHRCPQLYPSPPHTD
>Mature_257_residues
MQIRHRYTYGLAATLLLLAAAVTLLLYHPQSDALWRIVSQQCLPHQQASGDPAPCAYLDRSQGYALFKDRRGALQYLLLP
TVRSSGIDDPQLLNPATPNYMALAWYSRPLLSQRYGQPIADSRLSLTINSRAGRTQDQLHIHLSCTRQAVVSQLWKIYPT
LGTQWQAVSNGINGHPYWARRLSNETLARESPFILLSRLNGAHDDMAAYGLALLPAPDGQLILLATRRALWRGSLASIEE
IQDHRCPQLYPSPPHTD

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=218, Percent_Identity=44.954128440367, Blast_Score=204, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 28784; Mature: 28784

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIRHRYTYGLAATLLLLAAAVTLLLYHPQSDALWRIVSQQCLPHQQASGDPAPCAYLDR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
SQGYALFKDRRGALQYLLLPTVRSSGIDDPQLLNPATPNYMALAWYSRPLLSQRYGQPIA
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEHHCHHHHHHCCCCCC
DSRLSLTINSRAGRTQDQLHIHLSCTRQAVVSQLWKIYPTLGTQWQAVSNGINGHPYWAR
CCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHH
RLSNETLARESPFILLSRLNGAHDDMAAYGLALLPAPDGQLILLATRRALWRGSLASIEE
HHCCHHHHCCCCEEEEEECCCCCHHHHHHCEEEEECCCCCEEEEEEHHHHHCCCHHHHHH
IQDHRCPQLYPSPPHTD
HHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQIRHRYTYGLAATLLLLAAAVTLLLYHPQSDALWRIVSQQCLPHQQASGDPAPCAYLDR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
SQGYALFKDRRGALQYLLLPTVRSSGIDDPQLLNPATPNYMALAWYSRPLLSQRYGQPIA
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEHHCHHHHHHCCCCCC
DSRLSLTINSRAGRTQDQLHIHLSCTRQAVVSQLWKIYPTLGTQWQAVSNGINGHPYWAR
CCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHH
RLSNETLARESPFILLSRLNGAHDDMAAYGLALLPAPDGQLILLATRRALWRGSLASIEE
HHCCHHHHCCCCEEEEEECCCCCHHHHHHCEEEEECCCCCEEEEEEHHHHHCCCHHHHHH
IQDHRCPQLYPSPPHTD
HHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]