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The map label for this gene is fdhE

Identifier: 238921565

GI number: 238921565

Start: 3603275

End: 3604201

Strand: Direct

Name: fdhE

Synonym: NT01EI_3717

Alternate gene names: 238921565

Gene position: 3603275-3604201 (Clockwise)

Preceding gene: 238921564

Following gene: 238921568

Centisome position: 94.52

GC content: 65.7

Gene sequence:

>927_bases
ATGAGCATTCGAATTCATCCCCAGGAGCAGATCGACGCCAAAAGCCGCTCAGGCGCACTGGGACCGATCGCCCCGCTACT
ACTGCCCAATCTGCAGCGACTGTACAGCCAACGCGCAGAGCGCCTGCGTATGCTGGCAGACGGACACCCGCTGACCGACT
ACCTGTGCTTTGCCGCCACGCTGGCCGACGCGCAGCAACAGGCGCTGTTCGATAACCCGCTAACGCTGGATCTGGCGCCG
GTCGTCGCCAACGCCGCCGCCAACGGCACCCCGCCACTGGCGACGCAAACCTTCGCCCGGACGCCCCACTGGCAGCGGCT
GCTGCTGGCCATCATCGCCGAGCTGCGTCCCCAGGCGCCGGTACACGTCCTGCCGGTGCTGGAGGGCCTGGAGAAGTGCG
CCGCCGGTGAGCGCGAAGCGCTGGCCAGCGCCCTGCTGGCGGGCGACTACGCCGCCGTCGGCAGCGACAGGGCGCTGTTC
CTGTGGGCCGCCCTCTCTCTTTACTGGGCCCAAATGGCCAGCCAGCTGCCCGGACGGGCACAGGCGGAGTACGGCGAACA
GCGCCACGTTTGCCCGGTGTGCGGCAGCATGCCGGTCAGCAGTGTCGTTCACATCGGCGGTAGCAACGGACTGCGCTATC
TGCACTGCAGTCTGTGCGAAAGCGAATGGCATATGGTGCGCGTGAAGTGCAGCAACTGCGAGGAGAGCCGCGACCTGAGC
TATTGGTCGCTGGAGAGCGAGCAGGCGGCGGTGAAGGCCGAAAGCTGCGGCGACTGCGGCAGCTATCTAAAAATCCTATA
CCAAGAAAAAGACAGCGGCGTCGATGCCGTGGCCGACGATCTCGCCACGCTGCTGCTGGATGCCAAAATGGAAGAGGCGG
GCTTCGCCCGCAGCAGTCTTAACCCCTTCCTGTTCCCCGGGGAGTAA

Upstream 100 bases:

>100_bases
GGTAAAAAGCCGGGCTGATCCCCCATTCTGTCGCGGACTCCCGTCGTCCCCCGGGCGGCGGGAGTCCGCGATGTATTCAC
AACACATCAGACGAAACCCT

Downstream 100 bases:

>100_bases
GACTCAACGCCGGGCGCAGCGCGCCCGGCCATCCCGATAGCGCTTAGAGGTACATCTTGCGCAGATAGTGCGGCACTGCA
TCGTCCGCGTTGCTGCCGAT

Product: formate dehydrogenase accessory protein FdhE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSIRIHPQEQIDAKSRSGALGPIAPLLLPNLQRLYSQRAERLRMLADGHPLTDYLCFAATLADAQQQALFDNPLTLDLAP
VVANAAANGTPPLATQTFARTPHWQRLLLAIIAELRPQAPVHVLPVLEGLEKCAAGEREALASALLAGDYAAVGSDRALF
LWAALSLYWAQMASQLPGRAQAEYGEQRHVCPVCGSMPVSSVVHIGGSNGLRYLHCSLCESEWHMVRVKCSNCEESRDLS
YWSLESEQAAVKAESCGDCGSYLKILYQEKDSGVDAVADDLATLLLDAKMEEAGFARSSLNPFLFPGE

Sequences:

>Translated_308_residues
MSIRIHPQEQIDAKSRSGALGPIAPLLLPNLQRLYSQRAERLRMLADGHPLTDYLCFAATLADAQQQALFDNPLTLDLAP
VVANAAANGTPPLATQTFARTPHWQRLLLAIIAELRPQAPVHVLPVLEGLEKCAAGEREALASALLAGDYAAVGSDRALF
LWAALSLYWAQMASQLPGRAQAEYGEQRHVCPVCGSMPVSSVVHIGGSNGLRYLHCSLCESEWHMVRVKCSNCEESRDLS
YWSLESEQAAVKAESCGDCGSYLKILYQEKDSGVDAVADDLATLLLDAKMEEAGFARSSLNPFLFPGE
>Mature_307_residues
SIRIHPQEQIDAKSRSGALGPIAPLLLPNLQRLYSQRAERLRMLADGHPLTDYLCFAATLADAQQQALFDNPLTLDLAPV
VANAAANGTPPLATQTFARTPHWQRLLLAIIAELRPQAPVHVLPVLEGLEKCAAGEREALASALLAGDYAAVGSDRALFL
WAALSLYWAQMASQLPGRAQAEYGEQRHVCPVCGSMPVSSVVHIGGSNGLRYLHCSLCESEWHMVRVKCSNCEESRDLSY
WSLESEQAAVKAESCGDCGSYLKILYQEKDSGVDAVADDLATLLLDAKMEEAGFARSSLNPFLFPGE

Specific function: Necessary for formate dehydrogenase activity

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family

Homologues:

Organism=Escherichia coli, GI1790324, Length=308, Percent_Identity=61.3636363636364, Blast_Score=399, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHE_EDWI9 (C5BB03)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002935080.1
- ProteinModelPortal:   C5BB03
- GeneID:   7960731
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3717
- OMA:   LCACEWH
- ProtClustDB:   PRK03564
- GO:   GO:0005737
- HAMAP:   MF_00611
- InterPro:   IPR006452
- PIRSF:   PIRSF018296
- TIGRFAMs:   TIGR01562

Pfam domain/function: PF04216 FdhE

EC number: NA

Molecular weight: Translated: 33402; Mature: 33271

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRIHPQEQIDAKSRSGALGPIAPLLLPNLQRLYSQRAERLRMLADGHPLTDYLCFAAT
CCEECCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LADAQQQALFDNPLTLDLAPVVANAAANGTPPLATQTFARTPHWQRLLLAIIAELRPQAP
HHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCC
VHVLPVLEGLEKCAAGEREALASALLAGDYAAVGSDRALFLWAALSLYWAQMASQLPGRA
EEHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
QAEYGEQRHVCPVCGSMPVSSVVHIGGSNGLRYLHCSLCESEWHMVRVKCSNCEESRDLS
HHHCCCCCCCCCCCCCCCHHHEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
YWSLESEQAAVKAESCGDCGSYLKILYQEKDSGVDAVADDLATLLLDAKMEEAGFARSSL
EEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC
NPFLFPGE
CCCCCCCC
>Mature Secondary Structure 
SIRIHPQEQIDAKSRSGALGPIAPLLLPNLQRLYSQRAERLRMLADGHPLTDYLCFAAT
CEECCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LADAQQQALFDNPLTLDLAPVVANAAANGTPPLATQTFARTPHWQRLLLAIIAELRPQAP
HHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCC
VHVLPVLEGLEKCAAGEREALASALLAGDYAAVGSDRALFLWAALSLYWAQMASQLPGRA
EEHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
QAEYGEQRHVCPVCGSMPVSSVVHIGGSNGLRYLHCSLCESEWHMVRVKCSNCEESRDLS
HHHCCCCCCCCCCCCCCCHHHEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
YWSLESEQAAVKAESCGDCGSYLKILYQEKDSGVDAVADDLATLLLDAKMEEAGFARSSL
EEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC
NPFLFPGE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA