| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is pheC [H]
Identifier: 238921538
GI number: 238921538
Start: 3580377
End: 3581147
Strand: Direct
Name: pheC [H]
Synonym: NT01EI_3690
Alternate gene names: 238921538
Gene position: 3580377-3581147 (Clockwise)
Preceding gene: 238921537
Following gene: 238921545
Centisome position: 93.92
GC content: 43.58
Gene sequence:
>771_bases ATGAAAAAAATACATTTTTGGTTGACGATTCTGTTATCACTTTCAGGTATTCATTCCGCAACGGCAAAAGGATGGCAGGA TATTAAACAGAGTGGAGAGTTACGTGTGGGAGTACCTGGTGACTATGCTCCTCTTGCATTTCACGACAAGCAAGGGCATC TGGTTGGTTTTGATATTGATATGGCGCATTCACTGGGCCAGGCGTTGCACCTCAATATCCGTTTTGTGCTGAGTAGCTGG CCTACGTTATCAGCGGATCTGGCTGCTGACAAGTTTGATATTGCGATGGGAGGGGTCACTGAAACCCCCGATAGAAGAGA AAAGTTCGCACTTTCCTCTCCTGTTCTTAAAAATGGGAAAATAGCACTGACACAGTGCAACAGGGTTAATGACTTCAAAT CCCTTGAGGATATAGACCATACAGAAGTCCGGGTTGTTGTTAATCCGGGAGGCACAAATCAGGACTATGTTGACATACAC ATCAGGCATGCGAAGGTTATTCGTGAAAGAGACAATACCGCCAGTTTGCAGCGGATCCGTGAGCGCAGCGCTGATATCAT GTTTACCGATTTACTCGAGGGTAACTATTACCAGAACAATGAGCCTGGCATCTTCTGTGTATCAATTATGAACATTTTAC CAGGAACAGTAAGCAATAAAGTTTATATGATGGCGAAGGATAATAAGTATCTTCTTAAAACTATAGACAAGTGGCTATCT GACGGAAACAAAAGCAGGCTTTCCAGAAAGTGGCAGATATCTACAGAGTAG
Upstream 100 bases:
>100_bases CCGTCCGACGGCCTATAGGACACTCTCCCGTGGCAATGGCAGGAAGGATATTTTATTCGCAGCCATAGTTTTAAACATTG ACTAAACATCGAGAGAGAAA
Downstream 100 bases:
>100_bases CAACACGCTTTTACTTATAAAATGACGAATATGAAAAGTTTTCAAGGCTTCTTTCGTCGAGCTCCTATATCATGGATACT TCCGTAGTGTTGGTCAGCCT
Product: ABC transporter, perplasmic amino acid binding protein
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKKIHFWLTILLSLSGIHSATAKGWQDIKQSGELRVGVPGDYAPLAFHDKQGHLVGFDIDMAHSLGQALHLNIRFVLSSW PTLSADLAADKFDIAMGGVTETPDRREKFALSSPVLKNGKIALTQCNRVNDFKSLEDIDHTEVRVVVNPGGTNQDYVDIH IRHAKVIRERDNTASLQRIRERSADIMFTDLLEGNYYQNNEPGIFCVSIMNILPGTVSNKVYMMAKDNKYLLKTIDKWLS DGNKSRLSRKWQISTE
Sequences:
>Translated_256_residues MKKIHFWLTILLSLSGIHSATAKGWQDIKQSGELRVGVPGDYAPLAFHDKQGHLVGFDIDMAHSLGQALHLNIRFVLSSW PTLSADLAADKFDIAMGGVTETPDRREKFALSSPVLKNGKIALTQCNRVNDFKSLEDIDHTEVRVVVNPGGTNQDYVDIH IRHAKVIRERDNTASLQRIRERSADIMFTDLLEGNYYQNNEPGIFCVSIMNILPGTVSNKVYMMAKDNKYLLKTIDKWLS DGNKSRLSRKWQISTE >Mature_256_residues MKKIHFWLTILLSLSGIHSATAKGWQDIKQSGELRVGVPGDYAPLAFHDKQGHLVGFDIDMAHSLGQALHLNIRFVLSSW PTLSADLAADKFDIAMGGVTETPDRREKFALSSPVLKNGKIALTQCNRVNDFKSLEDIDHTEVRVVVNPGGTNQDYVDIH IRHAKVIRERDNTASLQRIRERSADIMFTDLLEGNYYQNNEPGIFCVSIMNILPGTVSNKVYMMAKDNKYLLKTIDKWLS DGNKSRLSRKWQISTE
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=244, Percent_Identity=23.3606557377049, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787085, Length=224, Percent_Identity=20.9821428571429, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 28867; Mature: 28867
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIHFWLTILLSLSGIHSATAKGWQDIKQSGELRVGVPGDYAPLAFHDKQGHLVGFDID CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCEEEEEHH MAHSLGQALHLNIRFVLSSWPTLSADLAADKFDIAMGGVTETPDRREKFALSSPVLKNGK HHHHCCCEEEEEEEEEEECCCCCCHHHCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCC IALTQCNRVNDFKSLEDIDHTEVRVVVNPGGTNQDYVDIHIRHAKVIRERDNTASLQRIR EEEEECCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEHHHHHHCCCHHHHHHHH ERSADIMFTDLLEGNYYQNNEPGIFCVSIMNILPGTVSNKVYMMAKDNKYLLKTIDKWLS HHCCCEEEEEECCCCCEECCCCCEEEEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHC DGNKSRLSRKWQISTE CCCHHHCCEEEEECCC >Mature Secondary Structure MKKIHFWLTILLSLSGIHSATAKGWQDIKQSGELRVGVPGDYAPLAFHDKQGHLVGFDID CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCEEEEEHH MAHSLGQALHLNIRFVLSSWPTLSADLAADKFDIAMGGVTETPDRREKFALSSPVLKNGK HHHHCCCEEEEEEEEEEECCCCCCHHHCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCC IALTQCNRVNDFKSLEDIDHTEVRVVVNPGGTNQDYVDIHIRHAKVIRERDNTASLQRIR EEEEECCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEHHHHHHCCCHHHHHHHH ERSADIMFTDLLEGNYYQNNEPGIFCVSIMNILPGTVSNKVYMMAKDNKYLLKTIDKWLS HHCCCEEEEEECCCCCEECCCCCEEEEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHC DGNKSRLSRKWQISTE CCCHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]