| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is malP [H]
Identifier: 238921518
GI number: 238921518
Start: 3557084
End: 3559489
Strand: Direct
Name: malP [H]
Synonym: NT01EI_3670
Alternate gene names: 238921518
Gene position: 3557084-3559489 (Clockwise)
Preceding gene: 238921516
Following gene: 238921519
Centisome position: 93.31
GC content: 61.72
Gene sequence:
>2406_bases ATGTCGTATATCCCGTTCGATCAGCAGGCTTTCCATGCAGCGCTGACCCGTCACTGGCAAGGATTGGGAATGGAGAGCGC AGCGCAAATGACGCCACATCAGTGGTGGCAGGCGGTCAGTCTCGCCTGCTCGGCACAGTTGGCAGCTGAAACCCACCCGG CCAGCACCTCTGACGATGGTCAACGCCGCGTAAACTATCTGTCGATGGAGTTTCTCATCGGTCGCCTGACCGGCAATAAC CTGCTCAATCTGGACTGGTATCCCGCTGTCACCCAGGCCCTTGAACGTTATGGCATCGCATTAAGTGATCTGCTGGAGCA AGAGGTCGATCCGGCGCTGGGCAACGGCGGCCTAGGCCGCCTGGCGGCCTGCTTCCTCGACGCCATGGCCTGCGTTAAAC AGCCGGCCATCGGCTATGGCCTATGCTACCAGTATGGGCTGTTCCGCCAGTCCTTTCAGGCGTGCCAGCAGCGGGAGGCC CCGGATGCATGGGGGCGGGACGATTACCCCTGGATGCACCACAACCGGGCGCGGGATGTCCACGTCAGCCTGGGCGGCAA ACTGCTGCGTGAAAATGGAGCGCTACGCTGGCAGCCAGCGCTAACCCTGCGCGGCGTCGCGCGCGATCTGCCGGTGGTCG GCTACCGTAACGGAATCAGCCAGCCACTGCGTCTGTGGGTCGCCTGCCACGATCACCCCTTCGACCTGGACAGCTTTGAT CGCGGGCAGTTTTTGCACGCCGAGCGTCAGGGCGTAGAGGCTGCCAAGCTGACCAAGATACTCTATCCCAACGATAATCA CCCGGCGGGAAAGCGGCTGCGCCTGATGCAGCAATACTTCCACTGCGCCTGCTCGCTGGCCGATATCCTGCGCCGACACC ATCTGGCCGGACGCCGTATCGACGATCTGGCGCAGTATGAGGTGATCCAGCTCAACGATACGCACCCGACCATCGCCATC CCCGAGCTGATGCGCATTCTGCTCGATGAGCACGGTATGGACTGGGAGCAGGCCTGGGCCATTACCAGCCAGACCTTTGC CTACACCAACCATACGCTGATGCCAGAGGCGTTGGAGTGCTGGAGCGAAAGCCTGATCCGCAGCCTGCTCCCGCGCCACC ATGACATCATCCGCCGGATCAACGCCCACTTCCGCGAGCTGGTCGAGCAGCGCTGGCCGGGCGATAAGGCGCTGTGGCAG CGCGTCGCCATCATACACGACCGACGGGTGCGCATGGCCAACCTGTGCGTCGTCGCCGGCTTTGCCGTCAACGGCGTGGC GCAGCTGCATTCGGCACTGGTCAAAAGCGATCTGTTCCCCGAATACCATCAGCTATGGCCACAAAAATTCCATAACGTAA CCAACGGGATCACCCCACGTCGCTGGCTCAAGCAGTGTAATCCGGCCCTTTCTGCGCTGATCGACAGTACGCTACAGCGC GAATGGGCCAACGATCTGGATGCCCTCCGCGCGCTGGAGCCCTATGCCGCCCAGGCCGGGTTCCGCGCGGCGTACCGTCA GATCAAGCAGCAGAATAAAGCGGCGCTGGCCCACTACATCCGGCAGACTCAGGGGCTGACACTGAATACCGACGCCATCT TCGACGTACAGATCAAGCGGCTGCATGAGTACAAGCGTCAGCACCTCAACCTGCTGCATATCCTCTCCCTGTACCATGAG CTGCGCGCTAACCCCAATGCCGATCGGGCTCCGCGCGTCTTCCTGTTCGGGGCCAAGGCAGCGCCGGGCTACTACCTGGC CAAAAACATCATCTATGCCATCAACCGGGTGGCAGAGGTCATCAACAGCGACCCGCGGGTCAAAGATCGTCTGCAGGTCG CCTTTCTGCCCGACTATCGCGTCTCCCTGGCCGAACTGATGATCCCGGCGGCCGACGTATCAGAGCAGATCTCCACCGCG GGGAAAGAGGCCTCCGGCACCGGCAACATGAAGCTGGCCCTGAACGGCGCGCTGACCGTGGGTACACTGGACGGCGCCAA CGTAGAGATCGCCGAGCAGGTGGGAGAAGAGAATATTTTCATCTTCGGCCTGACGGTCGAAGAGGTGAAGGCGACCCTGG CCACCGGATACGACCCGCTCCGCCTCTATCGGAAAGACAAACACCTGAAGGCCATCATTGATGAGCTGGGTTCCGGCCAC TACAGCCAGGGCGATCGCCACGCTTTTGACATGATGCTGCACAGCTTGCTGCAGGGCGGCGACCCCTATCTGGTGCTGGC TGACTTCGCCGATTACTGCCAGACACAGGCCCGGGTGGATATCCTCTACCGCGATAGCGAAGCGTGGACCGGGAAGACCA TCCTCAACACGGCACGGGTGGGCATGTTCAGTGCCGATCGGGCCATCCGCGACTATCAACAGCGCATCTGGCAGCGCCAG CGTTAA
Upstream 100 bases:
>100_bases CCAACTCAGCCGACGGCGGGAGGATGTTTTTACCCTGCGAGATCGTCAGGATGGCCATCATGCTTAATACTTTAATTCTG ACGCTTTGAGAGAGATGCCT
Downstream 100 bases:
>100_bases GGAGTCGCCATGCAACGCACTACGCCGCACACCGCCCTGGAGCAGCAGGCGGCCCAGGCGGGGATCGCCGACAGCTACAT CAACGCGCACGGCCGCGTTC
Product: maltodextrin phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MSYIPFDQQAFHAALTRHWQGLGMESAAQMTPHQWWQAVSLACSAQLAAETHPASTSDDGQRRVNYLSMEFLIGRLTGNN LLNLDWYPAVTQALERYGIALSDLLEQEVDPALGNGGLGRLAACFLDAMACVKQPAIGYGLCYQYGLFRQSFQACQQREA PDAWGRDDYPWMHHNRARDVHVSLGGKLLRENGALRWQPALTLRGVARDLPVVGYRNGISQPLRLWVACHDHPFDLDSFD RGQFLHAERQGVEAAKLTKILYPNDNHPAGKRLRLMQQYFHCACSLADILRRHHLAGRRIDDLAQYEVIQLNDTHPTIAI PELMRILLDEHGMDWEQAWAITSQTFAYTNHTLMPEALECWSESLIRSLLPRHHDIIRRINAHFRELVEQRWPGDKALWQ RVAIIHDRRVRMANLCVVAGFAVNGVAQLHSALVKSDLFPEYHQLWPQKFHNVTNGITPRRWLKQCNPALSALIDSTLQR EWANDLDALRALEPYAAQAGFRAAYRQIKQQNKAALAHYIRQTQGLTLNTDAIFDVQIKRLHEYKRQHLNLLHILSLYHE LRANPNADRAPRVFLFGAKAAPGYYLAKNIIYAINRVAEVINSDPRVKDRLQVAFLPDYRVSLAELMIPAADVSEQISTA GKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGLTVEEVKATLATGYDPLRLYRKDKHLKAIIDELGSGH YSQGDRHAFDMMLHSLLQGGDPYLVLADFADYCQTQARVDILYRDSEAWTGKTILNTARVGMFSADRAIRDYQQRIWQRQ R
Sequences:
>Translated_801_residues MSYIPFDQQAFHAALTRHWQGLGMESAAQMTPHQWWQAVSLACSAQLAAETHPASTSDDGQRRVNYLSMEFLIGRLTGNN LLNLDWYPAVTQALERYGIALSDLLEQEVDPALGNGGLGRLAACFLDAMACVKQPAIGYGLCYQYGLFRQSFQACQQREA PDAWGRDDYPWMHHNRARDVHVSLGGKLLRENGALRWQPALTLRGVARDLPVVGYRNGISQPLRLWVACHDHPFDLDSFD RGQFLHAERQGVEAAKLTKILYPNDNHPAGKRLRLMQQYFHCACSLADILRRHHLAGRRIDDLAQYEVIQLNDTHPTIAI PELMRILLDEHGMDWEQAWAITSQTFAYTNHTLMPEALECWSESLIRSLLPRHHDIIRRINAHFRELVEQRWPGDKALWQ RVAIIHDRRVRMANLCVVAGFAVNGVAQLHSALVKSDLFPEYHQLWPQKFHNVTNGITPRRWLKQCNPALSALIDSTLQR EWANDLDALRALEPYAAQAGFRAAYRQIKQQNKAALAHYIRQTQGLTLNTDAIFDVQIKRLHEYKRQHLNLLHILSLYHE LRANPNADRAPRVFLFGAKAAPGYYLAKNIIYAINRVAEVINSDPRVKDRLQVAFLPDYRVSLAELMIPAADVSEQISTA GKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGLTVEEVKATLATGYDPLRLYRKDKHLKAIIDELGSGH YSQGDRHAFDMMLHSLLQGGDPYLVLADFADYCQTQARVDILYRDSEAWTGKTILNTARVGMFSADRAIRDYQQRIWQRQ R >Mature_800_residues SYIPFDQQAFHAALTRHWQGLGMESAAQMTPHQWWQAVSLACSAQLAAETHPASTSDDGQRRVNYLSMEFLIGRLTGNNL LNLDWYPAVTQALERYGIALSDLLEQEVDPALGNGGLGRLAACFLDAMACVKQPAIGYGLCYQYGLFRQSFQACQQREAP DAWGRDDYPWMHHNRARDVHVSLGGKLLRENGALRWQPALTLRGVARDLPVVGYRNGISQPLRLWVACHDHPFDLDSFDR GQFLHAERQGVEAAKLTKILYPNDNHPAGKRLRLMQQYFHCACSLADILRRHHLAGRRIDDLAQYEVIQLNDTHPTIAIP ELMRILLDEHGMDWEQAWAITSQTFAYTNHTLMPEALECWSESLIRSLLPRHHDIIRRINAHFRELVEQRWPGDKALWQR VAIIHDRRVRMANLCVVAGFAVNGVAQLHSALVKSDLFPEYHQLWPQKFHNVTNGITPRRWLKQCNPALSALIDSTLQRE WANDLDALRALEPYAAQAGFRAAYRQIKQQNKAALAHYIRQTQGLTLNTDAIFDVQIKRLHEYKRQHLNLLHILSLYHEL RANPNADRAPRVFLFGAKAAPGYYLAKNIIYAINRVAEVINSDPRVKDRLQVAFLPDYRVSLAELMIPAADVSEQISTAG KEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGLTVEEVKATLATGYDPLRLYRKDKHLKAIIDELGSGHY SQGDRHAFDMMLHSLLQGGDPYLVLADFADYCQTQARVDILYRDSEAWTGKTILNTARVGMFSADRAIRDYQQRIWQRQR
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=755, Percent_Identity=43.7086092715232, Blast_Score=615, Evalue=1e-176, Organism=Homo sapiens, GI71037379, Length=752, Percent_Identity=43.218085106383, Blast_Score=607, Evalue=1e-173, Organism=Homo sapiens, GI21361370, Length=747, Percent_Identity=44.1767068273092, Blast_Score=605, Evalue=1e-173, Organism=Homo sapiens, GI255653002, Length=688, Percent_Identity=43.0232558139535, Blast_Score=587, Evalue=1e-167, Organism=Homo sapiens, GI257900462, Length=660, Percent_Identity=43.4848484848485, Blast_Score=559, Evalue=1e-159, Organism=Escherichia coli, GI48994936, Length=802, Percent_Identity=69.2019950124688, Blast_Score=1164, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=771, Percent_Identity=45.9143968871595, Blast_Score=678, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=754, Percent_Identity=46.551724137931, Blast_Score=673, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=754, Percent_Identity=46.551724137931, Blast_Score=672, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=810, Percent_Identity=41.9753086419753, Blast_Score=569, Evalue=1e-163, Organism=Drosophila melanogaster, GI78706832, Length=747, Percent_Identity=45.2476572958501, Blast_Score=636, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=747, Percent_Identity=45.2476572958501, Blast_Score=636, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 90904; Mature: 90772
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYIPFDQQAFHAALTRHWQGLGMESAAQMTPHQWWQAVSLACSAQLAAETHPASTSDDG CCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH QRRVNYLSMEFLIGRLTGNNLLNLDWYPAVTQALERYGIALSDLLEQEVDPALGNGGLGR HHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH LAACFLDAMACVKQPAIGYGLCYQYGLFRQSFQACQQREAPDAWGRDDYPWMHHNRARDV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE HVSLGGKLLRENGALRWQPALTLRGVARDLPVVGYRNGISQPLRLWVACHDHPFDLDSFD EEECCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCC RGQFLHAERQGVEAAKLTKILYPNDNHPAGKRLRLMQQYFHCACSLADILRRHHLAGRRI CCCCHHHHHCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DDLAQYEVIQLNDTHPTIAIPELMRILLDEHGMDWEQAWAITSQTFAYTNHTLMPEALEC HHHHCEEEEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCHHHHHH WSESLIRSLLPRHHDIIRRINAHFRELVEQRWPGDKALWQRVAIIHDRRVRMANLCVVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHH FAVNGVAQLHSALVKSDLFPEYHQLWPQKFHNVTNGITPRRWLKQCNPALSALIDSTLQR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH EWANDLDALRALEPYAAQAGFRAAYRQIKQQNKAALAHYIRQTQGLTLNTDAIFDVQIKR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEHHHHHH LHEYKRQHLNLLHILSLYHELRANPNADRAPRVFLFGAKAAPGYYLAKNIIYAINRVAEV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH INSDPRVKDRLQVAFLPDYRVSLAELMIPAADVSEQISTAGKEASGTGNMKLALNGALTV HCCCCCHHHCEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECEEEE GTLDGANVEIAEQVGEENIFIFGLTVEEVKATLATGYDPLRLYRKDKHLKAIIDELGSGH EECCCCCCHHHHHCCCCCEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC YSQGDRHAFDMMLHSLLQGGDPYLVLADFADYCQTQARVDILYRDSEAWTGKTILNTARV CCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHH GMFSADRAIRDYQQRIWQRQR CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SYIPFDQQAFHAALTRHWQGLGMESAAQMTPHQWWQAVSLACSAQLAAETHPASTSDDG CCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH QRRVNYLSMEFLIGRLTGNNLLNLDWYPAVTQALERYGIALSDLLEQEVDPALGNGGLGR HHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH LAACFLDAMACVKQPAIGYGLCYQYGLFRQSFQACQQREAPDAWGRDDYPWMHHNRARDV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE HVSLGGKLLRENGALRWQPALTLRGVARDLPVVGYRNGISQPLRLWVACHDHPFDLDSFD EEECCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCC RGQFLHAERQGVEAAKLTKILYPNDNHPAGKRLRLMQQYFHCACSLADILRRHHLAGRRI CCCCHHHHHCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DDLAQYEVIQLNDTHPTIAIPELMRILLDEHGMDWEQAWAITSQTFAYTNHTLMPEALEC HHHHCEEEEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCHHHHHH WSESLIRSLLPRHHDIIRRINAHFRELVEQRWPGDKALWQRVAIIHDRRVRMANLCVVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHH FAVNGVAQLHSALVKSDLFPEYHQLWPQKFHNVTNGITPRRWLKQCNPALSALIDSTLQR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH EWANDLDALRALEPYAAQAGFRAAYRQIKQQNKAALAHYIRQTQGLTLNTDAIFDVQIKR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEHHHHHH LHEYKRQHLNLLHILSLYHELRANPNADRAPRVFLFGAKAAPGYYLAKNIIYAINRVAEV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH INSDPRVKDRLQVAFLPDYRVSLAELMIPAADVSEQISTAGKEASGTGNMKLALNGALTV HCCCCCHHHCEEEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECEEEE GTLDGANVEIAEQVGEENIFIFGLTVEEVKATLATGYDPLRLYRKDKHLKAIIDELGSGH EECCCCCCHHHHHCCCCCEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC YSQGDRHAFDMMLHSLLQGGDPYLVLADFADYCQTQARVDILYRDSEAWTGKTILNTARV CCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHH GMFSADRAIRDYQQRIWQRQR CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037809; 9278503; 3155826; 2845225; 6283313; 6339728; 6986282; 9009262; 10220320; 10469642 [H]