| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is eamB [H]
Identifier: 238921516
GI number: 238921516
Start: 3553295
End: 3553900
Strand: Direct
Name: eamB [H]
Synonym: NT01EI_3668
Alternate gene names: 238921516
Gene position: 3553295-3553900 (Clockwise)
Preceding gene: 238921511
Following gene: 238921518
Centisome position: 93.21
GC content: 62.21
Gene sequence:
>606_bases ATGGATACGCCTCTGTTTCTCTCCCTGCTGGGTTTCCTGTGGGCCGCTGCCGTGACCCCTGGCCCCAATAATATGCTGTT GACCAGCTCCAGTGCCAATCTGGGGTTTTACCGCTCGCTGCCGCTCATGCTCGGCATCATGCTGGGCATGCAAACGCTGT TGCTACTGATCGCCTTTGGCGTCGGCAGCCTGCTGCTACTCTACCCGACGCTGCACACCCTGCTCAAGGGCGCAGGCAGC CTCTACCTGCTGTATATCGCGTGGAAAGTGACGACATCGCGCTATACCCGCCTGAGCGACGGTACCGCCGCCTTAGACGA CGCCGTCAGCTGGCGACAGGGCTGGCTGCTGCAGTTTCTGAACCCCAAGGCCTGGCTGATGGCCCTGGGTGCGGTGACCA GCTTTAGCCTGCCCGGCGAGCGCTATCTGACGACCATCGCCGCCATCAGCCTGGGAATGTGCTTGGTCAATCTGTTGGCC GGTGCCCTGTGGTTAGGCTTCGGCACCCTGATCGGGCGCCTGCTGCAAAGCCGGCGCGCCTGGTTCACCTTTAACCTGAT CATGGGAACGCTGACCGCCGCCTGCGTACTGCTGATCTGGCGCTGA
Upstream 100 bases:
>100_bases TGCTGCGTGAATAAAATTCATCCGGGGAATACTTGTACCATCAATAACACACTGTTAGGGTCAAAACACCCCCTTGGCGC AAAATCGGAGCCGGTTGAGC
Downstream 100 bases:
>100_bases TCAGACCCCATAGCCCATCAGGCGCATGATATCCTGTGCCTGACGCACGGCCTCCTGACGGTGCGCAACCCCCAGCTTCT GATACAGATTGCGGATATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MDTPLFLSLLGFLWAAAVTPGPNNMLLTSSSANLGFYRSLPLMLGIMLGMQTLLLLIAFGVGSLLLLYPTLHTLLKGAGS LYLLYIAWKVTTSRYTRLSDGTAALDDAVSWRQGWLLQFLNPKAWLMALGAVTSFSLPGERYLTTIAAISLGMCLVNLLA GALWLGFGTLIGRLLQSRRAWFTFNLIMGTLTAACVLLIWR
Sequences:
>Translated_201_residues MDTPLFLSLLGFLWAAAVTPGPNNMLLTSSSANLGFYRSLPLMLGIMLGMQTLLLLIAFGVGSLLLLYPTLHTLLKGAGS LYLLYIAWKVTTSRYTRLSDGTAALDDAVSWRQGWLLQFLNPKAWLMALGAVTSFSLPGERYLTTIAAISLGMCLVNLLA GALWLGFGTLIGRLLQSRRAWFTFNLIMGTLTAACVLLIWR >Mature_201_residues MDTPLFLSLLGFLWAAAVTPGPNNMLLTSSSANLGFYRSLPLMLGIMLGMQTLLLLIAFGVGSLLLLYPTLHTLLKGAGS LYLLYIAWKVTTSRYTRLSDGTAALDDAVSWRQGWLLQFLNPKAWLMALGAVTSFSLPGERYLTTIAAISLGMCLVNLLA GALWLGFGTLIGRLLQSRRAWFTFNLIMGTLTAACVLLIWR
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=184, Percent_Identity=31.5217391304348, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21936; Mature: 21936
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTPLFLSLLGFLWAAAVTPGPNNMLLTSSSANLGFYRSLPLMLGIMLGMQTLLLLIAFG CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGSLLLLYPTLHTLLKGAGSLYLLYIAWKVTTSRYTRLSDGTAALDDAVSWRQGWLLQFL HHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH NPKAWLMALGAVTSFSLPGERYLTTIAAISLGMCLVNLLAGALWLGFGTLIGRLLQSRRA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFTFNLIMGTLTAACVLLIWR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTPLFLSLLGFLWAAAVTPGPNNMLLTSSSANLGFYRSLPLMLGIMLGMQTLLLLIAFG CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGSLLLLYPTLHTLLKGAGSLYLLYIAWKVTTSRYTRLSDGTAALDDAVSWRQGWLLQFL HHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH NPKAWLMALGAVTSFSLPGERYLTTIAAISLGMCLVNLLAGALWLGFGTLIGRLLQSRRA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFTFNLIMGTLTAACVLLIWR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA