Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is ulaE [H]

Identifier: 238921510

GI number: 238921510

Start: 3547310

End: 3548182

Strand: Direct

Name: ulaE [H]

Synonym: NT01EI_3662

Alternate gene names: 238921510

Gene position: 3547310-3548182 (Clockwise)

Preceding gene: 238921509

Following gene: 238921511

Centisome position: 93.05

GC content: 65.41

Gene sequence:

>873_bases
ATGCTGCATCCTACCGTGCCGCTGGGCATCTATGAAAAGGCGCTGCCGGCCGACGAGGAGTGGCCACAGCGCCTGACACA
GGCCGCACAGCTCGGGTTCGACTTCGTCGAAATGTCTATCGATGAAAGCGATCGCCGCCTGGCCCGGCTGAGCTGGTCGC
GCCAGCAGCGTTTGGAGCTGCTGGCGGCGATGGCGCACAGCGGCGTGCGTATTCCCTCCCTGTGCCTCAGCGCCCACCGC
CGATTTCCGCTGGGCAGCGAGGATCAGGAGGTCAGACGCCAGGCGCTGCGGCTGCTGGCCCACGCGATTACCCTCGCACA
GGATCTGGGGATCCGGGTGATTCAGCTGGCGGGATACGACGTCTACTATCAGCAGGGCAATCCCCTGACCCGCCAGCTGT
TCCGCGAGGGGCTGAGCCAGGCTGTCACCCTGGCTAGCCGGGCACAGGTCACGCTGGCCATGGAGACCATGGACACGCCG
CTGCTCAACTCCATCAGCAAGGCACTCGGCTACTGCCGCTATCTGCGCAGCCCCTGGTTCCAGATCTACCCGGATATCGG
CAATCTTTCGGCCTGGGATAATGATGTCGAACTGGAGCTGGCGGCAGCCATCGACCACATCGTCGCCGTACATGTCAAAG
ACACCCGGCCGGGCCAGTTTCGGGATGTGCCCTTCGGCAGCGGCGTGGTCGACTTTGAGGCCTGCTTCCGCACGCTGGAT
CGCCATGGCTACCGCGGTCCCTACCTGATCGAGATGTGGAACGAAAGCGCCCCGGGCCCTCTGCAGGCGGTGCGCGAGGC
GCGCGACTGGGTCATGGAGCGGATGCGGCGTGCCGGGCTGGCGGTGGCACAGGAGGCATCATGGAACGGCTGA

Upstream 100 bases:

>100_bases
TTCATCGCCGGACGCAGCATCCGCGAGGCCGACGATCCGCTGGCCGCCGCGCATCGCTTCAAACAGCGCATCGCCCAGCT
GTGGGGCTAAGGAGACCAAT

Downstream 100 bases:

>100_bases
AACAGCAGGTCTGCCAGGCCAACATGGCCCTGCCGCACCACGGGCTGGTCACCTTTACCTGGGGCAACGTCAGCGCCATC
GATCGCCAGTGCGGCCATGT

Product: L-xylulose 5-phosphate 3-epimerase

Products: NA

Alternate protein names: L-ascorbate utilization protein E; L-xylulose-5-phosphate 3-epimerase [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLHPTVPLGIYEKALPADEEWPQRLTQAAQLGFDFVEMSIDESDRRLARLSWSRQQRLELLAAMAHSGVRIPSLCLSAHR
RFPLGSEDQEVRRQALRLLAHAITLAQDLGIRVIQLAGYDVYYQQGNPLTRQLFREGLSQAVTLASRAQVTLAMETMDTP
LLNSISKALGYCRYLRSPWFQIYPDIGNLSAWDNDVELELAAAIDHIVAVHVKDTRPGQFRDVPFGSGVVDFEACFRTLD
RHGYRGPYLIEMWNESAPGPLQAVREARDWVMERMRRAGLAVAQEASWNG

Sequences:

>Translated_290_residues
MLHPTVPLGIYEKALPADEEWPQRLTQAAQLGFDFVEMSIDESDRRLARLSWSRQQRLELLAAMAHSGVRIPSLCLSAHR
RFPLGSEDQEVRRQALRLLAHAITLAQDLGIRVIQLAGYDVYYQQGNPLTRQLFREGLSQAVTLASRAQVTLAMETMDTP
LLNSISKALGYCRYLRSPWFQIYPDIGNLSAWDNDVELELAAAIDHIVAVHVKDTRPGQFRDVPFGSGVVDFEACFRTLD
RHGYRGPYLIEMWNESAPGPLQAVREARDWVMERMRRAGLAVAQEASWNG
>Mature_290_residues
MLHPTVPLGIYEKALPADEEWPQRLTQAAQLGFDFVEMSIDESDRRLARLSWSRQQRLELLAAMAHSGVRIPSLCLSAHR
RFPLGSEDQEVRRQALRLLAHAITLAQDLGIRVIQLAGYDVYYQQGNPLTRQLFREGLSQAVTLASRAQVTLAMETMDTP
LLNSISKALGYCRYLRSPWFQIYPDIGNLSAWDNDVELELAAAIDHIVAVHVKDTRPGQFRDVPFGSGVVDFEACFRTLD
RHGYRGPYLIEMWNESAPGPLQAVREARDWVMERMRRAGLAVAQEASWNG

Specific function: Catalyzes the isomerization of L-xylulose-5-phosphate to L-ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization [H]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HUMPI family [H]

Homologues:

Organism=Escherichia coli, GI1790641, Length=283, Percent_Identity=67.4911660777385, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI87082294, Length=279, Percent_Identity=57.7060931899642, Blast_Score=327, Evalue=6e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004560
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.1.3.22 [H]

Molecular weight: Translated: 32816; Mature: 32816

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHPTVPLGIYEKALPADEEWPQRLTQAAQLGFDFVEMSIDESDRRLARLSWSRQQRLEL
CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LAAMAHSGVRIPSLCLSAHRRFPLGSEDQEVRRQALRLLAHAITLAQDLGIRVIQLAGYD
HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
VYYQQGNPLTRQLFREGLSQAVTLASRAQVTLAMETMDTPLLNSISKALGYCRYLRSPWF
EEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCHHHHHHHHHHHHHHHHHCCCE
QIYPDIGNLSAWDNDVELELAAAIDHIVAVHVKDTRPGQFRDVPFGSGVVDFEACFRTLD
EECCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
RHGYRGPYLIEMWNESAPGPLQAVREARDWVMERMRRAGLAVAQEASWNG
HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
>Mature Secondary Structure
MLHPTVPLGIYEKALPADEEWPQRLTQAAQLGFDFVEMSIDESDRRLARLSWSRQQRLEL
CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LAAMAHSGVRIPSLCLSAHRRFPLGSEDQEVRRQALRLLAHAITLAQDLGIRVIQLAGYD
HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
VYYQQGNPLTRQLFREGLSQAVTLASRAQVTLAMETMDTPLLNSISKALGYCRYLRSPWF
EEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCHHHHHHHHHHHHHHHHHCCCE
QIYPDIGNLSAWDNDVELELAAAIDHIVAVHVKDTRPGQFRDVPFGSGVVDFEACFRTLD
EECCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
RHGYRGPYLIEMWNESAPGPLQAVREARDWVMERMRRAGLAVAQEASWNG
HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA