| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238921366
Identifier: 238921366
GI number: 238921366
Start: 3404442
End: 3404852
Strand: Direct
Name: 238921366
Synonym: NT01EI_3510
Alternate gene names: NA
Gene position: 3404442-3404852 (Clockwise)
Preceding gene: 238921362
Following gene: 238921367
Centisome position: 89.3
GC content: 55.23
Gene sequence:
>411_bases ATGATGAAAAAAACTTGTATGGCTTTACTGACGATAGCTTCCTTTTCAGGTATCGCTCAGGCGACGGAGATGATCGGCCC CTACCCAGCCGTGGGTGAAACGAACTGTGGGGGGCTGAAAGTGCTCTCTACCGCCATCAACAGCGATAATATGATGGCGC TGAAAATCACCGATCCGTCGAATAACCTGACCCAGACCTATTTGGCCAAGCGCACCGAGGATATGTCCGACCAGGTGGTC TATACCCTGTCGCGCTACGACGGGGCCAGCCGCCGTTTCACGCCGGATCCGGCGCACATTACCATCCGCTTCGGGATCAA GATGCAGACCGGCGTACCGGGCACCGATCGCTATAACATGACCATCGGCAACCAGCAGTTTGTCTGCTCACCGTTCACCA TCTTTCCCTGA
Upstream 100 bases:
>100_bases GGATGACGTTGGCGGCGCTTTTCGACTGCCATGGGGTGCCCTCTGCCCCGGCTGTATTTTGATGACATGACGTCCTTTAT CACATCAGGCAAACATGACG
Downstream 100 bases:
>100_bases GCCTAAGCGGGCGCCGGCGCGCGCCCGTTTACCCCAGCGCTCCCCCCGCCTCGGTGCGCATCTCCTGGCCAAAAACGCCA CGTTTTACCGGCGATCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MMKKTCMALLTIASFSGIAQATEMIGPYPAVGETNCGGLKVLSTAINSDNMMALKITDPSNNLTQTYLAKRTEDMSDQVV YTLSRYDGASRRFTPDPAHITIRFGIKMQTGVPGTDRYNMTIGNQQFVCSPFTIFP
Sequences:
>Translated_136_residues MMKKTCMALLTIASFSGIAQATEMIGPYPAVGETNCGGLKVLSTAINSDNMMALKITDPSNNLTQTYLAKRTEDMSDQVV YTLSRYDGASRRFTPDPAHITIRFGIKMQTGVPGTDRYNMTIGNQQFVCSPFTIFP >Mature_136_residues MMKKTCMALLTIASFSGIAQATEMIGPYPAVGETNCGGLKVLSTAINSDNMMALKITDPSNNLTQTYLAKRTEDMSDQVV YTLSRYDGASRRFTPDPAHITIRFGIKMQTGVPGTDRYNMTIGNQQFVCSPFTIFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14902; Mature: 14902
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKTCMALLTIASFSGIAQATEMIGPYPAVGETNCGGLKVLSTAINSDNMMALKITDPS CCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC NNLTQTYLAKRTEDMSDQVVYTLSRYDGASRRFTPDPAHITIRFGIKMQTGVPGTDRYNM CCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEE TIGNQQFVCSPFTIFP EECCCEEEECCEEECC >Mature Secondary Structure MMKKTCMALLTIASFSGIAQATEMIGPYPAVGETNCGGLKVLSTAINSDNMMALKITDPS CCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC NNLTQTYLAKRTEDMSDQVVYTLSRYDGASRRFTPDPAHITIRFGIKMQTGVPGTDRYNM CCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEE TIGNQQFVCSPFTIFP EECCCEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA