| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921295
Identifier: 238921295
GI number: 238921295
Start: 3327023
End: 3327577
Strand: Direct
Name: 238921295
Synonym: NT01EI_3438
Alternate gene names: NA
Gene position: 3327023-3327577 (Clockwise)
Preceding gene: 238921293
Following gene: 238921307
Centisome position: 87.27
GC content: 51.17
Gene sequence:
>555_bases ATGTTCAATTTCAATAAATCAGATATAAATGCCCTGAGCCTGATCATGGTTCCGCTTATTTTATCTATAATTGGTATCTG GATTAACCCGGCAATCATCGGGCCCGCCAGCCTCGGCAGCTGCATTTTTTATGTTTACACCGACCGTAAGCAACGCAAAC AGGCCGGGGTGAAGTCTCCCTCATTCTGGTGGTGGCTGCTGTCACCGGTCTATCTGTGGAAACGCGACACTCTGGACAGC CGGGCCAAACATCCCCTGTTTCTGCTCTGGTGCGTATCCATCGTGGTAATGGTGCTGATCAGCCTGGCGGATGAGGCCAA GGACTCCAATCAGCAGGTGAAAACCCGCACCTGCGAACTGGTGACGGAAATCATGCACGATAACCGCATTGAAGGATCCT GTGTCAAGACCATGGAGCTGAACCGGGTGGAAGGCACCGAGTTCTATCGTGGCACCGTATTGATCACTAACGGTAACGAG GTACCCGTCACCACCGATATGCAGAAGGATGGGAACATCTACGTGCGTATCACCGATACTTCTACTTTGCGTTAA
Upstream 100 bases:
>100_bases CAATATCCGCAGTACTAAAAACGATAAATTTATCTTAGTTCGCTTTACATATGCCGAAAGGCGCTATTTGGTGTGGTTAA AATGCAAAAGGAAACACGTT
Downstream 100 bases:
>100_bases ACAATCACGATGGCTGAAGGAGGTCGCGCCTTCAGCCACCTCTCAACCTATGCTATTTTTGGATTGGACTGCTCCCAAAA CCATAGACAAATTCTGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSPSFWWWLLSPVYLWKRDTLDS RAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCELVTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNE VPVTTDMQKDGNIYVRITDTSTLR
Sequences:
>Translated_184_residues MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSPSFWWWLLSPVYLWKRDTLDS RAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCELVTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNE VPVTTDMQKDGNIYVRITDTSTLR >Mature_184_residues MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSPSFWWWLLSPVYLWKRDTLDS RAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCELVTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNE VPVTTDMQKDGNIYVRITDTSTLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20990; Mature: 20990
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSP CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCHHHHHCCCCCC SFWWWLLSPVYLWKRDTLDSRAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCEL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNEVPVTTDMQKDGNIYVRITDT HHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCEEEEEECC STLR CCCC >Mature Secondary Structure MFNFNKSDINALSLIMVPLILSIIGIWINPAIIGPASLGSCIFYVYTDRKQRKQAGVKSP CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCHHHHHCCCCCC SFWWWLLSPVYLWKRDTLDSRAKHPLFLLWCVSIVVMVLISLADEAKDSNQQVKTRTCEL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VTEIMHDNRIEGSCVKTMELNRVEGTEFYRGTVLITNGNEVPVTTDMQKDGNIYVRITDT HHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCEEEEEECC STLR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA