| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921170
Identifier: 238921170
GI number: 238921170
Start: 3195093
End: 3195347
Strand: Reverse
Name: 238921170
Synonym: NT01EI_3311
Alternate gene names: NA
Gene position: 3195347-3195093 (Counterclockwise)
Preceding gene: 238921171
Following gene: 238921169
Centisome position: 83.82
GC content: 30.59
Gene sequence:
>255_bases ATGAAACTTATTCAAACTGTTGGTCTTCGATTATTATGCTTTTTGATAATTTATTGTGTTTGTATTTCTACAGGCATTAT ATTTTTTATTAGACTGCTGATTACTTGTATTTATTTCTATAAAAATGGTCTTTTTGAGTTTGATTGGGTACTTAATGTTA TCTACTCAGTAAAAATGGGACTCTCCGGAGGGATTCCTTTGGGTATAGGTTGTTGGATTTTATCTAAACTTGATGAACGT AAGCGCTTAAGTTGA
Upstream 100 bases:
>100_bases ATCTATGGCTGCAATTGATGACCTGCAAATCCACCACAACATGTTTAGCTTGGCAAACCGGAGGCGACCATCTATGAATA AGAAGAATCAGGAGTGATAG
Downstream 100 bases:
>100_bases GAATAATTTCCTTGCGCCACAAATCATGCCTAAAGGCATGATGGATTATGGTCTGGCGGTGAACTCATGGCTGGATTATG CTTTAACGCATAAGTTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKLIQTVGLRLLCFLIIYCVCISTGIIFFIRLLITCIYFYKNGLFEFDWVLNVIYSVKMGLSGGIPLGIGCWILSKLDER KRLS
Sequences:
>Translated_84_residues MKLIQTVGLRLLCFLIIYCVCISTGIIFFIRLLITCIYFYKNGLFEFDWVLNVIYSVKMGLSGGIPLGIGCWILSKLDER KRLS >Mature_84_residues MKLIQTVGLRLLCFLIIYCVCISTGIIFFIRLLITCIYFYKNGLFEFDWVLNVIYSVKMGLSGGIPLGIGCWILSKLDER KRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9658; Mature: 9658
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIQTVGLRLLCFLIIYCVCISTGIIFFIRLLITCIYFYKNGLFEFDWVLNVIYSVKMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC LSGGIPLGIGCWILSKLDERKRLS CCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLIQTVGLRLLCFLIIYCVCISTGIIFFIRLLITCIYFYKNGLFEFDWVLNVIYSVKMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC LSGGIPLGIGCWILSKLDERKRLS CCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA