| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yfgJ [H]
Identifier: 238921033
GI number: 238921033
Start: 3045065
End: 3045289
Strand: Reverse
Name: yfgJ [H]
Synonym: NT01EI_3163
Alternate gene names: 238921033
Gene position: 3045289-3045065 (Counterclockwise)
Preceding gene: 238921034
Following gene: 238921032
Centisome position: 79.88
GC content: 57.78
Gene sequence:
>225_bases ATGCAAGCTAGCTGTCCGCAGTGCCAGCATGAGCTACAGTGGCAGCAGGATGGGCGCTTTTTCTGCCCATCCTGCCGTCA GGCCTATCGCCGTGAGGCGCGCTGTCCCCAGTGCCAGCAGCCGCTACAGGAGCTGAAAGCGTGCGGTGCTGCTGATTATT TCTGCCCGCATGGGCATGGGCTGATCTCTAAAAAGCAGCTGCACATACGCTATATTTCCTGCTAA
Upstream 100 bases:
>100_bases GGCGGCGAATATTATTGCCATTACCACCCTGGGATCGTTTTTTACCACGGCGCTGGGGCTTTACTTCCTGCGTCAGTGGG GCCTTATTTAGGAGAGTGTG
Downstream 100 bases:
>100_bases ATACAGATTCATTTTTAATTATATTTAAATACCCCAATTGGGGTATTTTTTATTTATTGTGATTTAATTTTATAGATTTT ATTTTTTATGTCGTAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MQASCPQCQHELQWQQDGRFFCPSCRQAYRREARCPQCQQPLQELKACGAADYFCPHGHGLISKKQLHIRYISC
Sequences:
>Translated_74_residues MQASCPQCQHELQWQQDGRFFCPSCRQAYRREARCPQCQQPLQELKACGAADYFCPHGHGLISKKQLHIRYISC >Mature_74_residues MQASCPQCQHELQWQQDGRFFCPSCRQAYRREARCPQCQQPLQELKACGAADYFCPHGHGLISKKQLHIRYISC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082119, Length=67, Percent_Identity=59.7014925373134, Blast_Score=78, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010807 - ProDom: PD060428 [H]
Pfam domain/function: PF07191 DUF1407 [H]
EC number: NA
Molecular weight: Translated: 8614; Mature: 8614
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 13.5 %Cys+Met (Translated Protein) 12.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 13.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASCPQCQHELQWQQDGRFFCPSCRQAYRREARCPQCQQPLQELKACGAADYFCPHGHG CCCCCCCHHHHCCCCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LISKKQLHIRYISC CCCCCCEEEEEECC >Mature Secondary Structure MQASCPQCQHELQWQQDGRFFCPSCRQAYRREARCPQCQQPLQELKACGAADYFCPHGHG CCCCCCCHHHHCCCCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LISKKQLHIRYISC CCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]