Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921014

Identifier: 238921014

GI number: 238921014

Start: 3026323

End: 3026997

Strand: Reverse

Name: 238921014

Synonym: NT01EI_3144

Alternate gene names: NA

Gene position: 3026997-3026323 (Counterclockwise)

Preceding gene: 238921021

Following gene: 238921013

Centisome position: 79.4

GC content: 32.44

Gene sequence:

>675_bases
ATGTTGGGGTTCATGATGGCGGTGGTAGCCGCAGCAGTTGGATATATCGGTATGAAAGACTCTGCATCCAGAAAATATCA
TAAGCCTGTTGTTATTCATTTGTTATCTATTTTGATGTCTTTATTTTCTTTTTTTCTTGTTGGTATCCCGTCTATAGCAG
GTGATTATCTATGGGGTGGGATATTTATTTTAATTTTATATTGTTGTGCATCGATGAAAGTATTACCACAACTTGTTAAT
AACCAACAGTATGATAAAAAAAATAGAAGTAATCTATTCGTATGGGAAAAATATCGCACGCGACAAAAGCAAAAGGCTAA
ATCAAAAGCGGAAAAGTTGAATGATGAGATTATCAGTCTCAGAAAATTAAGTGATAAAAATAGACAAGCTAGCTATGATA
TTACGACTTTTTCTGATGAGCATATGGTTAAAAACAAAACAACAATAAGAAAGAAAAAAATCAACAAGAAGAAAATACTA
GAATCCGGGCGAATTTCTTTTGACTATATTGATGTTGACGGTAATTATACTTCTCGTGAGATAGATATAAGTGATGTTGA
TAGTGTATATTTAAAAGGATACTGCTATTTATCTAATGGGTATAGGACGTTCCGTATTGATAGAATTCAAGGTGATATTG
TTTGTCGAGATACAGGTGAGATTTTATGCGATTAA

Upstream 100 bases:

>100_bases
ACCGGGCTTCAACACCTGAACATCAGTCCACCCTTGATACGGTTAGCATTGCGCTTGCGCAATCGGGGGGAATAGGTTCA
AAGATTAAGGGAGCATAAAA

Downstream 100 bases:

>100_bases
CAAAAGCTGTGAAAGCTTTTTATTATTTTCTTCAGGATAAAGAGCGCTCTAACTCTTCTTTTAGTGAGAGTGAAATATTA
GAAGTTACAAAGTGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLGFMMAVVAAAVGYIGMKDSASRKYHKPVVIHLLSILMSLFSFFLVGIPSIAGDYLWGGIFILILYCCASMKVLPQLVN
NQQYDKKNRSNLFVWEKYRTRQKQKAKSKAEKLNDEIISLRKLSDKNRQASYDITTFSDEHMVKNKTTIRKKKINKKKIL
ESGRISFDYIDVDGNYTSREIDISDVDSVYLKGYCYLSNGYRTFRIDRIQGDIVCRDTGEILCD

Sequences:

>Translated_224_residues
MLGFMMAVVAAAVGYIGMKDSASRKYHKPVVIHLLSILMSLFSFFLVGIPSIAGDYLWGGIFILILYCCASMKVLPQLVN
NQQYDKKNRSNLFVWEKYRTRQKQKAKSKAEKLNDEIISLRKLSDKNRQASYDITTFSDEHMVKNKTTIRKKKINKKKIL
ESGRISFDYIDVDGNYTSREIDISDVDSVYLKGYCYLSNGYRTFRIDRIQGDIVCRDTGEILCD
>Mature_224_residues
MLGFMMAVVAAAVGYIGMKDSASRKYHKPVVIHLLSILMSLFSFFLVGIPSIAGDYLWGGIFILILYCCASMKVLPQLVN
NQQYDKKNRSNLFVWEKYRTRQKQKAKSKAEKLNDEIISLRKLSDKNRQASYDITTFSDEHMVKNKTTIRKKKINKKKIL
ESGRISFDYIDVDGNYTSREIDISDVDSVYLKGYCYLSNGYRTFRIDRIQGDIVCRDTGEILCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25793; Mature: 25793

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGFMMAVVAAAVGYIGMKDSASRKYHKPVVIHLLSILMSLFSFFLVGIPSIAGDYLWGG
CHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
IFILILYCCASMKVLPQLVNNQQYDKKNRSNLFVWEKYRTRQKQKAKSKAEKLNDEIISL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RKLSDKNRQASYDITTFSDEHMVKNKTTIRKKKINKKKILESGRISFDYIDVDGNYTSRE
HHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCE
IDISDVDSVYLKGYCYLSNGYRTFRIDRIQGDIVCRDTGEILCD
ECHHHHCCEEEEEEEEEECCEEEEEEEEECCCEEEECCCCCCCC
>Mature Secondary Structure
MLGFMMAVVAAAVGYIGMKDSASRKYHKPVVIHLLSILMSLFSFFLVGIPSIAGDYLWGG
CHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
IFILILYCCASMKVLPQLVNNQQYDKKNRSNLFVWEKYRTRQKQKAKSKAEKLNDEIISL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RKLSDKNRQASYDITTFSDEHMVKNKTTIRKKKINKKKILESGRISFDYIDVDGNYTSRE
HHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCE
IDISDVDSVYLKGYCYLSNGYRTFRIDRIQGDIVCRDTGEILCD
ECHHHHCCEEEEEEEEEECCEEEEEEEEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA