| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920984
Identifier: 238920984
GI number: 238920984
Start: 3002758
End: 3002982
Strand: Reverse
Name: 238920984
Synonym: NT01EI_3114
Alternate gene names: NA
Gene position: 3002982-3002758 (Counterclockwise)
Preceding gene: 238920985
Following gene: 238920982
Centisome position: 78.77
GC content: 51.11
Gene sequence:
>225_bases TTGTGCTACGACGGTGAGATTGAACTGAGTACGCCGCGTGACCGTGAAAATACCTTCGAACCTCAGCTGATTAAGAAGAT CCAGACCCGTGTTACGCAGATGGACAGCCAGATTTTACCTCTTTACGCCAAAGGCCTGACGACGTGTGAAATCGGCGCCA CGGTCAAAGAAATGTATGACGCCGATGAGTCCTCCCACGCTGATCCTGATATTTACACGCGGTGA
Upstream 100 bases:
>100_bases AAACAGCGCTTAATGCTGAACTGACGGGACACCTCAGGTATGAGAAAATGCCCCAAAATTAGGCTCGAATACCCGCAACG GCTATTCATCCAAAACGCTG
Downstream 100 bases:
>100_bases GATTTGCTTTTTATCATTGACGTGATGTAGGCCCGCGACATTCTCACCAACTCGATGCCAGGGATAGCCAGGTTACCTAT CCATATGCATCAGCCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase Mutator Type; Transposase Mutator Family; Transposase Mutator Family Protein; Transposase-Like Protein; Mutator Family Transposase
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MCYDGEIELSTPRDRENTFEPQLIKKIQTRVTQMDSQILPLYAKGLTTCEIGATVKEMYDADESSHADPDIYTR
Sequences:
>Translated_74_residues MCYDGEIELSTPRDRENTFEPQLIKKIQTRVTQMDSQILPLYAKGLTTCEIGATVKEMYDADESSHADPDIYTR >Mature_74_residues MCYDGEIELSTPRDRENTFEPQLIKKIQTRVTQMDSQILPLYAKGLTTCEIGATVKEMYDADESSHADPDIYTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8473; Mature: 8473
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCYDGEIELSTPRDRENTFEPQLIKKIQTRVTQMDSQILPLYAKGLTTCEIGATVKEMYD CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHC ADESSHADPDIYTR CCCCCCCCCCCCCC >Mature Secondary Structure MCYDGEIELSTPRDRENTFEPQLIKKIQTRVTQMDSQILPLYAKGLTTCEIGATVKEMYD CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHC ADESSHADPDIYTR CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA