| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920981
Identifier: 238920981
GI number: 238920981
Start: 2999726
End: 3000316
Strand: Reverse
Name: 238920981
Synonym: NT01EI_3111
Alternate gene names: NA
Gene position: 3000316-2999726 (Counterclockwise)
Preceding gene: 238920982
Following gene: 238920975
Centisome position: 78.7
GC content: 57.7
Gene sequence:
>591_bases ATGGATGTCAGCCGCGATGCCGATGATTTATTTTCCGCCTTTGCCGAGGCCGGGGGCGATCGTGACTGGACATGGCTTAG CACTGCACGTCCCTCATCAGTTGTCGCAATGCAGGCGTGGATGCAGAAAAAGGTGGATGACACGTCCCTTATCCCCTTTG TGGTGATCGATTTGCTCACCGGGTGTGCGGTTGGTGTGGTGTGTCTGATGGCGATCAATCCGGCGAACGGCACGCTAGAG ATAGGCCACGTTAGCTGGTCGCCGCGCATGCAGCGCACGACGTTGGGTACGGAGGCCATTTGGCTGCTGCTACGCGAGGC GTTTACCTGTGGCTATCGCCGCGTGGAGTGGAAGTGTGATTCGCTGAATACGGCGTCGCATCAGGCCGCGGAGCGTATTG GCTTTACGTTTGAGGGACGTTTCCGTCAGCATATGGTACGCAAGGGCCGCAGCCGTGACACTGACTGGCTATCGGTTATT GATAGGGAGTGGCCCGGGGTGGATGCGGCGTTGCAAGCGTGGCTTTCTGAAAGTAATTTTGATGAGATGGGGCGGCAGCG ACGTACGCTAAAGCAGTGTCGCGAACGATGA
Upstream 100 bases:
>100_bases TGAATATGGGCAACGCGTCGGAGAGGTACTTCCTGGCTGGATAGGAGGTGGTGTCTTGGCAGGGAAAGTGCTTATCGGGC GCACCTGTCGGCTAATCCCT
Downstream 100 bases:
>100_bases GCCATCGCATTTGACGGGGTTGGCCTGGTCGGGGGGCGCCGCTGCTGCTCCATGGCCTCAGTAGGGTCGAGTCCGTCAAG GGGTGTCAATTCAGTTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; Amino-Acid Acetyltransferase; Ribosomal Protein Serine Acetyltransferase; Ribosomal-Protein-Serine Acetyltransferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltransferase Protein; Amino-Acid Acetyltransferase Transmembrane Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDVSRDADDLFSAFAEAGGDRDWTWLSTARPSSVVAMQAWMQKKVDDTSLIPFVVIDLLTGCAVGVVCLMAINPANGTLE IGHVSWSPRMQRTTLGTEAIWLLLREAFTCGYRRVEWKCDSLNTASHQAAERIGFTFEGRFRQHMVRKGRSRDTDWLSVI DREWPGVDAALQAWLSESNFDEMGRQRRTLKQCRER
Sequences:
>Translated_196_residues MDVSRDADDLFSAFAEAGGDRDWTWLSTARPSSVVAMQAWMQKKVDDTSLIPFVVIDLLTGCAVGVVCLMAINPANGTLE IGHVSWSPRMQRTTLGTEAIWLLLREAFTCGYRRVEWKCDSLNTASHQAAERIGFTFEGRFRQHMVRKGRSRDTDWLSVI DREWPGVDAALQAWLSESNFDEMGRQRRTLKQCRER >Mature_196_residues MDVSRDADDLFSAFAEAGGDRDWTWLSTARPSSVVAMQAWMQKKVDDTSLIPFVVIDLLTGCAVGVVCLMAINPANGTLE IGHVSWSPRMQRTTLGTEAIWLLLREAFTCGYRRVEWKCDSLNTASHQAAERIGFTFEGRFRQHMVRKGRSRDTDWLSVI DREWPGVDAALQAWLSESNFDEMGRQRRTLKQCRER
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322233, Length=196, Percent_Identity=42.8571428571429, Blast_Score=172, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22304; Mature: 22304
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSRDADDLFSAFAEAGGDRDWTWLSTARPSSVVAMQAWMQKKVDDTSLIPFVVIDLLT CCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GCAVGVVCLMAINPANGTLEIGHVSWSPRMQRTTLGTEAIWLLLREAFTCGYRRVEWKCD HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC SLNTASHQAAERIGFTFEGRFRQHMVRKGRSRDTDWLSVIDREWPGVDAALQAWLSESNF CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCH DEMGRQRRTLKQCRER HHHHHHHHHHHHHHCC >Mature Secondary Structure MDVSRDADDLFSAFAEAGGDRDWTWLSTARPSSVVAMQAWMQKKVDDTSLIPFVVIDLLT CCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GCAVGVVCLMAINPANGTLEIGHVSWSPRMQRTTLGTEAIWLLLREAFTCGYRRVEWKCD HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC SLNTASHQAAERIGFTFEGRFRQHMVRKGRSRDTDWLSVIDREWPGVDAALQAWLSESNF CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCH DEMGRQRRTLKQCRER HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA