| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yjgF [C]
Identifier: 238920951
GI number: 238920951
Start: 2970919
End: 2971122
Strand: Reverse
Name: yjgF [C]
Synonym: NT01EI_3081
Alternate gene names: 238920951
Gene position: 2971122-2970919 (Counterclockwise)
Preceding gene: 238920953
Following gene: 238920949
Centisome position: 77.93
GC content: 49.02
Gene sequence:
>204_bases ATGCTGGCGCTTAATATGATTAAAAACGGATCCTCGATAGGAGATATCATATTAACTACATTGATTATTAACCTGCATCA ACGCAGCCTATGGGGTATTTTCACGGATCACGGCGTTCCGTTTCCGGCGCGCTCCTGCGTCGAGGTTGCCCGTCTGCCGA AGGATACCCTGATCGGGATCGAGGCTATCGCCTTGTATCGATAA
Upstream 100 bases:
>100_bases TCAGTCGGATAGAGATGATTTTCCGTTTTACGTCGGTGCGGGAATGAGCATATGGCAGAGTACGGTTTGCTCCTGCATTG TTATCACCGGATCGACGTAG
Downstream 100 bases:
>100_bases TTCTCCGGCTACCAACCAGTGGATTATGTCTCCATATCGCCAAACGCCACCTGTCGGTGGCGCTGTTTATGGGAAAGCAG AGGCCGCCCTGTCAGTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MLALNMIKNGSSIGDIILTTLIINLHQRSLWGIFTDHGVPFPARSCVEVARLPKDTLIGIEAIALYR
Sequences:
>Translated_67_residues MLALNMIKNGSSIGDIILTTLIINLHQRSLWGIFTDHGVPFPARSCVEVARLPKDTLIGIEAIALYR >Mature_67_residues MLALNMIKNGSSIGDIILTTLIINLHQRSLWGIFTDHGVPFPARSCVEVARLPKDTLIGIEAIALYR
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7389; Mature: 7389
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALNMIKNGSSIGDIILTTLIINLHQRSLWGIFTDHGVPFPARSCVEVARLPKDTLIGI CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCHHHHH EAIALYR HEEEECC >Mature Secondary Structure MLALNMIKNGSSIGDIILTTLIINLHQRSLWGIFTDHGVPFPARSCVEVARLPKDTLIGI CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCHHHHH EAIALYR HEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA