Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920927

Identifier: 238920927

GI number: 238920927

Start: 2939885

End: 2940265

Strand: Reverse

Name: 238920927

Synonym: NT01EI_3055

Alternate gene names: NA

Gene position: 2940265-2939885 (Counterclockwise)

Preceding gene: 238920928

Following gene: 238920922

Centisome position: 77.13

GC content: 33.07

Gene sequence:

>381_bases
ATGGTTGAGTTAGGAACACCTGATGAAATGGCTGATTTTTTTGAATTTTTCTTTAAAAGTATAAAGGATGATAAAAATCA
TGCTATTTTGGATAGGCTTTATAAAAAATATGTAAGGCTTGAGGAATTGCAAGAGATAAACAGAATAACTCAAGGATTCA
AAGATAGCTTATCAACTGATATAAAAGATAAATATTCAAAGTATATAGCTGGCATTGAAACATGTATTGAATCGGCTAAG
TTGTTTCATGAAAGCTGGGGTATTTATCAGCCACTTAGAGTCGGAATAACTGATGTTCCTTTTTATATTGATGATAAGAG
AAGGCCCTTGGCTCAATATGATGCTCTTAGCTCGGAAGATTCTCCCTTCTGGTTACGTTAA

Upstream 100 bases:

>100_bases
GAGGTATTGTTCAAAGATCCAATGGAATAATTAATCCCACAAACATCCAATTTAAAAGGTAGTAGTTATGAGACATGTTG
GATTTATAGGTGGAAGCTCA

Downstream 100 bases:

>100_bases
AACCAAAGATCCCGACCCTGTACACGATTCTGTGTAAATGCCTTTTCTCAGAAGTGACCGTCCAGACGATCACCGAACTC
GATAATAAAGCGGCTCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MVELGTPDEMADFFEFFFKSIKDDKNHAILDRLYKKYVRLEELQEINRITQGFKDSLSTDIKDKYSKYIAGIETCIESAK
LFHESWGIYQPLRVGITDVPFYIDDKRRPLAQYDALSSEDSPFWLR

Sequences:

>Translated_126_residues
MVELGTPDEMADFFEFFFKSIKDDKNHAILDRLYKKYVRLEELQEINRITQGFKDSLSTDIKDKYSKYIAGIETCIESAK
LFHESWGIYQPLRVGITDVPFYIDDKRRPLAQYDALSSEDSPFWLR
>Mature_126_residues
MVELGTPDEMADFFEFFFKSIKDDKNHAILDRLYKKYVRLEELQEINRITQGFKDSLSTDIKDKYSKYIAGIETCIESAK
LFHESWGIYQPLRVGITDVPFYIDDKRRPLAQYDALSSEDSPFWLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14901; Mature: 14901

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELGTPDEMADFFEFFFKSIKDDKNHAILDRLYKKYVRLEELQEINRITQGFKDSLSTD
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKDKYSKYIAGIETCIESAKLFHESWGIYQPLRVGITDVPFYIDDKRRPLAQYDALSSED
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCCHHHHHCCCCCC
SPFWLR
CCCCCC
>Mature Secondary Structure
MVELGTPDEMADFFEFFFKSIKDDKNHAILDRLYKKYVRLEELQEINRITQGFKDSLSTD
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKDKYSKYIAGIETCIESAKLFHESWGIYQPLRVGITDVPFYIDDKRRPLAQYDALSSED
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCCHHHHHCCCCCC
SPFWLR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA