Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920920

Identifier: 238920920

GI number: 238920920

Start: 2934610

End: 2934969

Strand: Reverse

Name: 238920920

Synonym: NT01EI_3048

Alternate gene names: NA

Gene position: 2934969-2934610 (Counterclockwise)

Preceding gene: 238920921

Following gene: 238920919

Centisome position: 76.99

GC content: 55.56

Gene sequence:

>360_bases
GTGGCTGATGCCAATCATAATGGACGCGCCTGCGGTATGACGCAGTCAGCCGTCTCTGACGGCGCGATCATCGTGCATGA
TCGGGCTAACCAGCAGCAGAATGTCGACACGCTGGCGCGTGATATTATCCGTGTATACTGGTCCTATCCCCTACCTTTAA
CAAGGATAAAACGCAGGCGTGCCTGCTGCAGGTCTCACCTGATTGGTGAGATAGGTAATCAGGTGGCAGGTATTGCGCGG
AGACAGGGTGAGATTGCCGGTGAGAAAACGAAACGTGATCCGGCAGCCCTGATTCAGGCCCATACCGAGCCGGCAGCTAC
CGACAAACCGCTCATCGGGCAGAATATGGCTGGTGTATAG

Upstream 100 bases:

>100_bases
GTATTTGGCTTTGAAGAATGTGGATCACAAAAAGACCCAACCGGGCTGTGCAATTAGCGGCCTGAATTTCGGCATTCTGG
GTTACTTGGCTGAATTCTGT

Downstream 100 bases:

>100_bases
CACCGGCAGGGCGTCTTCGGGAATGGGAAAATACCAACAGGGTATTCAGGCGGCCACTGCGGCGACATCCCATATATTGC
AGATGTGGTGAAAGCGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MADANHNGRACGMTQSAVSDGAIIVHDRANQQQNVDTLARDIIRVYWSYPLPLTRIKRRRACCRSHLIGEIGNQVAGIAR
RQGEIAGEKTKRDPAALIQAHTEPAATDKPLIGQNMAGV

Sequences:

>Translated_119_residues
MADANHNGRACGMTQSAVSDGAIIVHDRANQQQNVDTLARDIIRVYWSYPLPLTRIKRRRACCRSHLIGEIGNQVAGIAR
RQGEIAGEKTKRDPAALIQAHTEPAATDKPLIGQNMAGV
>Mature_118_residues
ADANHNGRACGMTQSAVSDGAIIVHDRANQQQNVDTLARDIIRVYWSYPLPLTRIKRRRACCRSHLIGEIGNQVAGIARR
QGEIAGEKTKRDPAALIQAHTEPAATDKPLIGQNMAGV

Specific function: Unknown

COG id: COG3210

COG function: function code U; Large exoproteins involved in heme utilization or adhesion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12939; Mature: 12808

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADANHNGRACGMTQSAVSDGAIIVHDRANQQQNVDTLARDIIRVYWSYPLPLTRIKRRR
CCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
ACCRSHLIGEIGNQVAGIARRQGEIAGEKTKRDPAALIQAHTEPAATDKPLIGQNMAGV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADANHNGRACGMTQSAVSDGAIIVHDRANQQQNVDTLARDIIRVYWSYPLPLTRIKRRR
CCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
ACCRSHLIGEIGNQVAGIARRQGEIAGEKTKRDPAALIQAHTEPAATDKPLIGQNMAGV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA