| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is tatA [H]
Identifier: 238920823
GI number: 238920823
Start: 2837391
End: 2837591
Strand: Reverse
Name: tatA [H]
Synonym: NT01EI_2949
Alternate gene names: 238920823
Gene position: 2837591-2837391 (Counterclockwise)
Preceding gene: 238920824
Following gene: 238920809
Centisome position: 74.43
GC content: 50.25
Gene sequence:
>201_bases ATGGAAGGTATTAGTATTACCAAGCTTCTGGTCATTGCTGTGCTGATCGTATTACTGTTTGGTACCAATAAGCTGCGTAC GCTGGGGTCCGATCTTGGGGCGGCGCTGAAAGGGTTCAAAAAAGCGATGAACGACGAGACGCCGGCGGCCAAAAAAAGTG ACGGTGTTGAGGCGGCACCCCGGGTAGAGAATAAAGAATAA
Upstream 100 bases:
>100_bases TGCGCTATTAGCCGTTTTTACGGTTAATAACTCTTGCTTACTGCAAGCGATGTTTCTTCGGCCGCCTGGGCGGTGCGGTA TACAACATAAGAAGGTATTT
Downstream 100 bases:
>100_bases TCCGGATATGCGGGGAGTTGGCCGATGGCTCGCGCTCCAGAATCGGGGGAAGAAGGAACATCCCTAAGTTGTAACCATTT TTGTCAGCGGCAGTATAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MEGISITKLLVIAVLIVLLFGTNKLRTLGSDLGAALKGFKKAMNDETPAAKKSDGVEAAPRVENKE
Sequences:
>Translated_66_residues MEGISITKLLVIAVLIVLLFGTNKLRTLGSDLGAALKGFKKAMNDETPAAKKSDGVEAAPRVENKE >Mature_66_residues MEGISITKLLVIAVLIVLLFGTNKLRTLGSDLGAALKGFKKAMNDETPAAKKSDGVEAAPRVENKE
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family [H]
Homologues:
Organism=Escherichia coli, GI87082337, Length=53, Percent_Identity=64.1509433962264, Blast_Score=74, Evalue=2e-15, Organism=Escherichia coli, GI1786845, Length=64, Percent_Identity=68.75, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR006312 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 6983; Mature: 6983
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGISITKLLVIAVLIVLLFGTNKLRTLGSDLGAALKGFKKAMNDETPAAKKSDGVEAAP CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RVENKE CCCCCC >Mature Secondary Structure MEGISITKLLVIAVLIVLLFGTNKLRTLGSDLGAALKGFKKAMNDETPAAKKSDGVEAAP CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC RVENKE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA