| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 238920780
GI number: 238920780
Start: 2789723
End: 2790037
Strand: Direct
Name: fur [H]
Synonym: NT01EI_2899
Alternate gene names: 238920780
Gene position: 2789723-2790037 (Clockwise)
Preceding gene: 238920779
Following gene: 238920783
Centisome position: 73.18
GC content: 56.83
Gene sequence:
>315_bases ATGGGCGAGGAGATCGGTCTGGCGACTGTATACCGCGTACTCAACCAGTTTGACGATGCCGGCATCGTGACCCGCCATAA CTTTGAGGGCGGTAAATCGGTTTTTGAGCTGACCCAGCAGCACCACCACGATCACCTGATCTGCCTGGACTGCGGCAAGG TCATCGAATTCAGCGATGAGTCCATTGAGAAGCGTCAGCGCGAAATCGCGAAAAAGCACGGCATCCAGCTGACCAACCAC AGCCTGTATCTCTACGGCCACTGCGCCGAAGGCGACTGCCGTAGCGATGAGACCCTGCACGATGAAAAGGCCTGA
Upstream 100 bases:
>100_bases CCTTAAAGTCACGCTTCCCCGTCTCAAGATTCTGGAAGTACTGCAAGATCCTACGTGCCATCATGTCAGTGCTGAAGACT TGTACAAGAAGCTAATCGAT
Downstream 100 bases:
>100_bases GTGACCTGGCGCCCACAGCAGGCGACGACGCGGCCCAGCGGGGCCGTTTTTTTCCCTGCGCGACAGCGGGCAAAAAAAAG GTTCATCGCGCTTTACCGGG
Product: ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDESIEKRQREIAKKHGIQLTNH SLYLYGHCAEGDCRSDETLHDEKA
Sequences:
>Translated_104_residues MGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDESIEKRQREIAKKHGIQLTNH SLYLYGHCAEGDCRSDETLHDEKA >Mature_103_residues GEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDESIEKRQREIAKKHGIQLTNHS LYLYGHCAEGDCRSDETLHDEKA
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of several outer-membrane proteins including the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=103, Percent_Identity=91.2621359223301, Blast_Score=196, Evalue=3e-52,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 11864; Mature: 11733
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDE CCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCH SIEKRQREIAKKHGIQLTNHSLYLYGHCAEGDCRSDETLHDEKA HHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure GEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDE CCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCH SIEKRQREIAKKHGIQLTNHSLYLYGHCAEGDCRSDETLHDEKA HHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9055816 [H]