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The map label for this gene is ybgI [C]

Identifier: 238920763

GI number: 238920763

Start: 2771159

End: 2771605

Strand: Reverse

Name: ybgI [C]

Synonym: NT01EI_2882

Alternate gene names: 238920763

Gene position: 2771605-2771159 (Counterclockwise)

Preceding gene: 238920764

Following gene: 238920761

Centisome position: 72.7

GC content: 61.74

Gene sequence:

>447_bases
TTGGATGCCCACCCCGAGCTGGGCAATAACGCCCAGCTGGCGCAGAGGCTAAGGATCGATCCGCGTGGGTTGATTGCACC
GCTGTTGCCCTATGGCGAGCTGGAGAGTCCCTGCAGCGCCGGAGAGCTGACGGAGCGTCTGGAGCGTAAGCTGCACCACG
GCGTTCTACACTGCGGCGATAGTGGACCCACACTGATCCGGCGCGTGGCATGGTGCAGCGGCGGCGGACAGGGATTTATT
GAGCAGGCAGCTACCTTTGGCGTCGACGCATTTATCAGCGGAGAGGTGTCAGAGCAGACGATCCACGTTGCCCGCGAAAT
GGGTATTCACTTCTTTGCCGCCGGCCATCACGCCACCGAGCGCGGTGGCGTGATGGCGCTGGGGGAGTGGCTGGCCAGAG
AGTATGATCTGGACGTTACCTTTATCGATATCGCCAACCCCGCATAG

Upstream 100 bases:

>100_bases
TTTTGGAAGAGTGAGTCGCCGACGGTGCGCGGGATGCGGCGTCAGCGCCTGAAAAACGCTGCTGGCTAACGACATCAACC
TGTATGCCTACCATCTACCG

Downstream 100 bases:

>100_bases
CGGCTGAGGGATCCCCATAAATCAGTGCTAATAAACCAGCACCATATTTTGGTAGGTTCTGACGAGGTGATTAAGAACGG
TGCTGAGTACCGTTCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDAHPELGNNAQLAQRLRIDPRGLIAPLLPYGELESPCSAGELTERLERKLHHGVLHCGDSGPTLIRRVAWCSGGGQGFI
EQAATFGVDAFISGEVSEQTIHVAREMGIHFFAAGHHATERGGVMALGEWLAREYDLDVTFIDIANPA

Sequences:

>Translated_148_residues
MDAHPELGNNAQLAQRLRIDPRGLIAPLLPYGELESPCSAGELTERLERKLHHGVLHCGDSGPTLIRRVAWCSGGGQGFI
EQAATFGVDAFISGEVSEQTIHVAREMGIHFFAAGHHATERGGVMALGEWLAREYDLDVTFIDIANPA
>Mature_148_residues
MDAHPELGNNAQLAQRLRIDPRGLIAPLLPYGELESPCSAGELTERLERKLHHGVLHCGDSGPTLIRRVAWCSGGGQGFI
EQAATFGVDAFISGEVSEQTIHVAREMGIHFFAAGHHATERGGVMALGEWLAREYDLDVTFIDIANPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=148, Percent_Identity=65.5405405405405, Blast_Score=200, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 16011; Mature: 16011

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHPELGNNAQLAQRLRIDPRGLIAPLLPYGELESPCSAGELTERLERKLHHGVLHCGD
CCCCCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECC
SGPTLIRRVAWCSGGGQGFIEQAATFGVDAFISGEVSEQTIHVAREMGIHFFAAGHHATE
CCHHHHHHHHHHCCCCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCEEEECCCCCCC
RGGVMALGEWLAREYDLDVTFIDIANPA
CCCCHHHHHHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure
MDAHPELGNNAQLAQRLRIDPRGLIAPLLPYGELESPCSAGELTERLERKLHHGVLHCGD
CCCCCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECC
SGPTLIRRVAWCSGGGQGFIEQAATFGVDAFISGEVSEQTIHVAREMGIHFFAAGHHATE
CCHHHHHHHHHHCCCCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCEEEECCCCCCC
RGGVMALGEWLAREYDLDVTFIDIANPA
CCCCHHHHHHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]