| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is modB [H]
Identifier: 238920722
GI number: 238920722
Start: 2727820
End: 2728512
Strand: Reverse
Name: modB [H]
Synonym: NT01EI_2835
Alternate gene names: 238920722
Gene position: 2728512-2727820 (Counterclockwise)
Preceding gene: 238920723
Following gene: 238920721
Centisome position: 71.57
GC content: 65.51
Gene sequence:
>693_bases ATGTTTCTCAGTCCCTACGAATGGGAGGCCGTGGTGCTGAGCCTGCAGGTGGCGGGCACCGCGGTGATCTTCAGTCTGCC GCTGGGCATTGCGACCGCCTGGGTGCTGGTGCGCTACCGGTTTCCCGGTAAGTCGCTGCTGGACAGCGTGATCCACCTGC CGCTGGTGCTGCCGCCGGTGGTCATCGGCTACCTGCTGCTGCTGGCGATGGGGCGCAAGGGGGTCATCGGTGCCTGGCTG TACAGCTGGTTTGGCTTCAGCTTCAGCTTCAGCTGGCATGGCGCCGCGCTGGCGTCGGCGGTGGTGGCGTTTCCGCTGAT GGTGCGCGCCATTCGTCTGGCGCTGGCCTCGGTGGATCGGCGCCTGGAGCAGGCGGCGCGCACGCTGGGCGCCAGCCCAC TGCGGGTCTTTTTTACCATTACCCTACCCCTGTCGTTTCCCGGCATTCTGGCCGGGACGGTGCTGGCCTTCGCCCGCTCG CTGGGTGAATTTGGCGCCACCATTACCTTTGTATCCAATATTCCCGGTGAGACGCGCACCATCCCGCTGGCGATGTATAC CCTGATCGAGACGCCGGGCGCTGAATCGGAGGCGGCCCGGTTGTGTGCGATCGCCATTGCACTGTCGCTGCTGTCGCTGA TGCTCTCCGAGTGGCTGGCGCGCTGGAGTCAGAAACGGCTGGGAGGTGGCTGA
Upstream 100 bases:
>100_bases ACAGAGCCCGGCGGTCGACGCCTTCTACGATTATCTGAAGGGGCCACAGGCGGCCACCGTCTTTACCCGTTACGGCTTCA CCCCGCGTTAATCCGTGAGT
Downstream 100 bases:
>100_bases GATGTTGCATATTGATCTTCGCCAGCGCCTGGGCGATCTGGATCTGCGGGTCGATGCCGATCTGCCGGGCGAGGGGATCA CCGCCATCTTCGGCCTGTCC
Product: molybdate ABC transporter, permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MFLSPYEWEAVVLSLQVAGTAVIFSLPLGIATAWVLVRYRFPGKSLLDSVIHLPLVLPPVVIGYLLLLAMGRKGVIGAWL YSWFGFSFSFSWHGAALASAVVAFPLMVRAIRLALASVDRRLEQAARTLGASPLRVFFTITLPLSFPGILAGTVLAFARS LGEFGATITFVSNIPGETRTIPLAMYTLIETPGAESEAARLCAIAIALSLLSLMLSEWLARWSQKRLGGG
Sequences:
>Translated_230_residues MFLSPYEWEAVVLSLQVAGTAVIFSLPLGIATAWVLVRYRFPGKSLLDSVIHLPLVLPPVVIGYLLLLAMGRKGVIGAWL YSWFGFSFSFSWHGAALASAVVAFPLMVRAIRLALASVDRRLEQAARTLGASPLRVFFTITLPLSFPGILAGTVLAFARS LGEFGATITFVSNIPGETRTIPLAMYTLIETPGAESEAARLCAIAIALSLLSLMLSEWLARWSQKRLGGG >Mature_230_residues MFLSPYEWEAVVLSLQVAGTAVIFSLPLGIATAWVLVRYRFPGKSLLDSVIHLPLVLPPVVIGYLLLLAMGRKGVIGAWL YSWFGFSFSFSWHGAALASAVVAFPLMVRAIRLALASVDRRLEQAARTLGASPLRVFFTITLPLSFPGILAGTVLAFARS LGEFGATITFVSNIPGETRTIPLAMYTLIETPGAESEAARLCAIAIALSLLSLMLSEWLARWSQKRLGGG
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=228, Percent_Identity=73.2456140350877, Blast_Score=300, Evalue=5e-83, Organism=Escherichia coli, GI1788764, Length=187, Percent_Identity=36.8983957219251, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI87082099, Length=226, Percent_Identity=35.3982300884956, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1787368, Length=220, Percent_Identity=29.0909090909091, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1787081, Length=231, Percent_Identity=32.4675324675325, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787369, Length=184, Percent_Identity=28.2608695652174, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1787080, Length=166, Percent_Identity=31.3253012048193, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24796; Mature: 24796
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSPYEWEAVVLSLQVAGTAVIFSLPLGIATAWVLVRYRFPGKSLLDSVIHLPLVLPPV CCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH VIGYLLLLAMGRKGVIGAWLYSWFGFSFSFSWHGAALASAVVAFPLMVRAIRLALASVDR HHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEQAARTLGASPLRVFFTITLPLSFPGILAGTVLAFARSLGEFGATITFVSNIPGETRT HHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC IPLAMYTLIETPGAESEAARLCAIAIALSLLSLMLSEWLARWSQKRLGGG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFLSPYEWEAVVLSLQVAGTAVIFSLPLGIATAWVLVRYRFPGKSLLDSVIHLPLVLPPV CCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH VIGYLLLLAMGRKGVIGAWLYSWFGFSFSFSWHGAALASAVVAFPLMVRAIRLALASVDR HHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEQAARTLGASPLRVFFTITLPLSFPGILAGTVLAFARSLGEFGATITFVSNIPGETRT HHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC IPLAMYTLIETPGAESEAARLCAIAIALSLLSLMLSEWLARWSQKRLGGG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]