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The map label for this gene is agaC [H]

Identifier: 238920701

GI number: 238920701

Start: 2705151

End: 2705921

Strand: Reverse

Name: agaC [H]

Synonym: NT01EI_2814

Alternate gene names: 238920701

Gene position: 2705921-2705151 (Counterclockwise)

Preceding gene: 238920702

Following gene: 238920700

Centisome position: 70.98

GC content: 56.03

Gene sequence:

>771_bases
ATGGTCTTCGAAGCTACCCTGGTTGCCATCTGGGCATTCTTATGTGGTATCGATAAATACGACGTTGCATTAAATATTCA
CCGACCATTAATTACTGGCCCGGTGGTCGGCTTAATTATGGGGAATATGGAAATCGGGTTGATCGCCGGCGCCACCCTGG
AGTTGGCATGGCTCGGTCTGGTGCCAAACGCCGGAGCGCAGCCGCCGGATGTAACCATGGGCACCATTGCCGCCGTCGCT
TTCGCCGTGATGACCGGCCAGTCCCCGGAGGTGGCGATGGGGGTCGGCATGCCGATCGCCGTACTGATGCAGATGATCGT
CATCGGCTTCTTCGCGCTGACGGCGTTCACCATGGGGAAAGCAGACGAGTATGCGGAGCAGGCGGATGCCGGCGGGATAT
CGCGCTTGTTGATCGGCACTATCGTCACGCGTTCGATGCTCTACTTTGTGATCGCTTTCGCCACCGTCTACTTCGGTGAG
CATGCCGCCGATTGGATCGACAAAAACACACCGAAAGCGCTGCTGGAAGGGCTGGGTATCGGCGCCAAGATGGTTCCGGC
AATCGGCTTCGCCATGTTGCTGAAAATCATGTGGTCCAAGGAGATGGCTGGGGTGTTCTTTATCGGCTTCGTGATGACCA
CCTACCTCAAGCTGCCGATCATGGCCGTGGCTATCCTCGGCGCGTCTATCGCCGTGTTGTACTACTTCTTCAGCGGTAAT
AAGTCCAATTCACAGCAGCAGGTTAAAGAGGAATTCGAAGATGGCATCTGA

Upstream 100 bases:

>100_bases
CAGACCAGTCACCGATTGATATTCTGACACTGGCTAAAAGCGCCTAATTCAGTGGGGGGATTATTCCCCCACTGTAACAC
TCCGCCTAAGGAATATATTT

Downstream 100 bases:

>100_bases
AGTCATTATCTCTCCGGCGCAGGAAGAAACGCGTAAGGCCGCCAGCCTGGTGGACAACGTGGATGCTTATCAGGATGGTG
AAGTCCGCAAGGTGATCACC

Product: phosphotransferase system PTS sorbose-specific IIC subunit

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MVFEATLVAIWAFLCGIDKYDVALNIHRPLITGPVVGLIMGNMEIGLIAGATLELAWLGLVPNAGAQPPDVTMGTIAAVA
FAVMTGQSPEVAMGVGMPIAVLMQMIVIGFFALTAFTMGKADEYAEQADAGGISRLLIGTIVTRSMLYFVIAFATVYFGE
HAADWIDKNTPKALLEGLGIGAKMVPAIGFAMLLKIMWSKEMAGVFFIGFVMTTYLKLPIMAVAILGASIAVLYYFFSGN
KSNSQQQVKEEFEDGI

Sequences:

>Translated_256_residues
MVFEATLVAIWAFLCGIDKYDVALNIHRPLITGPVVGLIMGNMEIGLIAGATLELAWLGLVPNAGAQPPDVTMGTIAAVA
FAVMTGQSPEVAMGVGMPIAVLMQMIVIGFFALTAFTMGKADEYAEQADAGGISRLLIGTIVTRSMLYFVIAFATVYFGE
HAADWIDKNTPKALLEGLGIGAKMVPAIGFAMLLKIMWSKEMAGVFFIGFVMTTYLKLPIMAVAILGASIAVLYYFFSGN
KSNSQQQVKEEFEDGI
>Mature_256_residues
MVFEATLVAIWAFLCGIDKYDVALNIHRPLITGPVVGLIMGNMEIGLIAGATLELAWLGLVPNAGAQPPDVTMGTIAAVA
FAVMTGQSPEVAMGVGMPIAVLMQMIVIGFFALTAFTMGKADEYAEQADAGGISRLLIGTIVTRSMLYFVIAFATVYFGE
HAADWIDKNTPKALLEGLGIGAKMVPAIGFAMLLKIMWSKEMAGVFFIGFVMTTYLKLPIMAVAILGASIAVLYYFFSGN
KSNSQQQVKEEFEDGI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=246, Percent_Identity=34.1463414634146, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1788121, Length=237, Percent_Identity=25.7383966244726, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 27323; Mature: 27323

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFEATLVAIWAFLCGIDKYDVALNIHRPLITGPVVGLIMGNMEIGLIAGATLELAWLGL
CCCHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHEEEE
VPNAGAQPPDVTMGTIAAVAFAVMTGQSPEVAMGVGMPIAVLMQMIVIGFFALTAFTMGK
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
ADEYAEQADAGGISRLLIGTIVTRSMLYFVIAFATVYFGEHAADWIDKNTPKALLEGLGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
GAKMVPAIGFAMLLKIMWSKEMAGVFFIGFVMTTYLKLPIMAVAILGASIAVLYYFFSGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KSNSQQQVKEEFEDGI
CCCHHHHHHHHHHCCC
>Mature Secondary Structure
MVFEATLVAIWAFLCGIDKYDVALNIHRPLITGPVVGLIMGNMEIGLIAGATLELAWLGL
CCCHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHEEEE
VPNAGAQPPDVTMGTIAAVAFAVMTGQSPEVAMGVGMPIAVLMQMIVIGFFALTAFTMGK
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
ADEYAEQADAGGISRLLIGTIVTRSMLYFVIAFATVYFGEHAADWIDKNTPKALLEGLGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
GAKMVPAIGFAMLLKIMWSKEMAGVFFIGFVMTTYLKLPIMAVAILGASIAVLYYFFSGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KSNSQQQVKEEFEDGI
CCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]