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The map label for this gene is 238920666

Identifier: 238920666

GI number: 238920666

Start: 2675604

End: 2675804

Strand: Reverse

Name: 238920666

Synonym: NT01EI_2779

Alternate gene names: NA

Gene position: 2675804-2675604 (Counterclockwise)

Preceding gene: 238920667

Following gene: 238920658

Centisome position: 70.19

GC content: 46.77

Gene sequence:

>201_bases
ATGGATAATGGGCCGGCATTTATCTCTCTGGCACTGGCGGTATGGGCAGAGAAACATGCAGTAAAACTTGAGTTTATCCA
GTCGGGTAAGCCGACGCAGAACGCTTTCATTGAGCGTTTTAACCGGACATACCGTACAGAAATACCCGATTTTTATCTGT
TCAGGACGCTGGATAAAGTGCGGGAAATCACGGGAAAATAG

Upstream 100 bases:

>100_bases
GCGTTATCGATTGAAATCGATCTGAATCTGTCAGCTACTGTGAGTCGTCTGTGTACTCGACAGGATCGCGGCAAACCGCG
GCTATCCGGTTATGATGTGC

Downstream 100 bases:

>100_bases
TTGTTAGAATATAACTGTGAACGCCCGCATGAATCACTGAACAATATGATGACGGAGGAATGCCGGCAGCACCATTATTC
GGCCGAGATCTCAAAAAATG

Product: ISSod2, transposase OrfB

Products: NA

Alternate protein names: Transposase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Transposase; Fragmented Integrase; Transposase Fragment; ISxcC1 Transposase; ISSod2 Transposase OrfB; Isxcc1 Transposase Orfb Protein; Transposase OrfB; Integrase Core Subunit; Transposase Insk For Insertion Sequence Element Is; IS3 Family Element Transposase OrfB; ISxcc1 Transposase ORFB Fragment; ISxac4 Transposase; Integrase Core Domain Contained Protein; IS3 Family Transposase; Transposase OrfB For Insertion Sequence Element; ISxac2 Transposase

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MDNGPAFISLALAVWAEKHAVKLEFIQSGKPTQNAFIERFNRTYRTEIPDFYLFRTLDKVREITGK

Sequences:

>Translated_66_residues
MDNGPAFISLALAVWAEKHAVKLEFIQSGKPTQNAFIERFNRTYRTEIPDFYLFRTLDKVREITGK
>Mature_66_residues
MDNGPAFISLALAVWAEKHAVKLEFIQSGKPTQNAFIERFNRTYRTEIPDFYLFRTLDKVREITGK

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7691; Mature: 7691

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGPAFISLALAVWAEKHAVKLEFIQSGKPTQNAFIERFNRTYRTEIPDFYLFRTLDKV
CCCCHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
REITGK
HHHCCC
>Mature Secondary Structure
MDNGPAFISLALAVWAEKHAVKLEFIQSGKPTQNAFIERFNRTYRTEIPDFYLFRTLDKV
CCCCHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
REITGK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA