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The map label for this gene is ynjA [H]

Identifier: 238920574

GI number: 238920574

Start: 2581384

End: 2581968

Strand: Reverse

Name: ynjA [H]

Synonym: NT01EI_2686

Alternate gene names: 238920574

Gene position: 2581968-2581384 (Counterclockwise)

Preceding gene: 238920577

Following gene: 238920573

Centisome position: 67.73

GC content: 65.81

Gene sequence:

>585_bases
GTGAAAAAAACAACGCAGACAGAGTGGGTAGCCCCCCTGCGGCGCCTGCCGCGCAGTCTGGCGCCGTTGCTGCATCTGCA
GCGGCGCCACTACGGTGAGGTGCTGAATCCTGTCCGCTGGTGGGGGCGCTTTCCCCGCCTGTTCTGGCTGATGGCGCTGT
TCGTTGGCTATCTGGAGCGTCGTCGCGCGACGCTCTCCCCCGGTCTGCGGGCGTTGGTGATGACCCGGGTCTCCCAGCGC
TGCGACTGTGCCTTCTGCATCGATGCCAATGGGTTGCGTCTGGCGCAGCGCTGCGGTTCGCTGGATAAGGTGCTGGCGGT
CGCGACATGGCAGGAGGCCGATTGTTTTGATGCGATGGAGCGGGCGGCGCTGGCCTATGCCGATGCCGTCAGCGCTACAC
CACCGCAGGTTTCTGCGGCGCTGAAGGCGGAGCTGCGCCGCCATTTCGACGATTGCGCGCTAACCGAGCTGACGGCGCTG
GTGGCGTTTCAAAATCTGTCGGCGCGCTTTAACGCTGCGCTGGATATCCCCGCGCAGGGGCTGTGTACGCCCGCTACCGG
GCGTCGGGGGGACGAGGATGCTTGA

Upstream 100 bases:

>100_bases
TTTTGCAGTTTATTTAACTAATTAATTAGTATTTATTGGATAAATAAACTGATAAAAAGAACGAATGACGTAAAGTTACG
ACAACAGAGAGGGAGAGCCG

Downstream 100 bases:

>100_bases
TCGCTATCTGCACCCACCGCTGAAGCCTGCGCTGGCCCGTCTGGCCACCGGGCTGGATCGCCGCGGGGTGAGAGCCGATG
GCCTGACGCTGTTCGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKKTTQTEWVAPLRRLPRSLAPLLHLQRRHYGEVLNPVRWWGRFPRLFWLMALFVGYLERRRATLSPGLRALVMTRVSQR
CDCAFCIDANGLRLAQRCGSLDKVLAVATWQEADCFDAMERAALAYADAVSATPPQVSAALKAELRRHFDDCALTELTAL
VAFQNLSARFNAALDIPAQGLCTPATGRRGDEDA

Sequences:

>Translated_194_residues
MKKTTQTEWVAPLRRLPRSLAPLLHLQRRHYGEVLNPVRWWGRFPRLFWLMALFVGYLERRRATLSPGLRALVMTRVSQR
CDCAFCIDANGLRLAQRCGSLDKVLAVATWQEADCFDAMERAALAYADAVSATPPQVSAALKAELRRHFDDCALTELTAL
VAFQNLSARFNAALDIPAQGLCTPATGRRGDEDA
>Mature_194_residues
MKKTTQTEWVAPLRRLPRSLAPLLHLQRRHYGEVLNPVRWWGRFPRLFWLMALFVGYLERRRATLSPGLRALVMTRVSQR
CDCAFCIDANGLRLAQRCGSLDKVLAVATWQEADCFDAMERAALAYADAVSATPPQVSAALKAELRRHFDDCALTELTAL
VAFQNLSARFNAALDIPAQGLCTPATGRRGDEDA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=171, Percent_Identity=56.7251461988304, Blast_Score=207, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 21714; Mature: 21714

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTQTEWVAPLRRLPRSLAPLLHLQRRHYGEVLNPVRWWGRFPRLFWLMALFVGYLER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRATLSPGLRALVMTRVSQRCDCAFCIDANGLRLAQRCGSLDKVLAVATWQEADCFDAME
HHHHHCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
RAALAYADAVSATPPQVSAALKAELRRHFDDCALTELTALVAFQNLSARFNAALDIPAQG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LCTPATGRRGDEDA
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTTQTEWVAPLRRLPRSLAPLLHLQRRHYGEVLNPVRWWGRFPRLFWLMALFVGYLER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRATLSPGLRALVMTRVSQRCDCAFCIDANGLRLAQRCGSLDKVLAVATWQEADCFDAME
HHHHHCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
RAALAYADAVSATPPQVSAALKAELRRHFDDCALTELTALVAFQNLSARFNAALDIPAQG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LCTPATGRRGDEDA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]