| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is cinA [C]
Identifier: 238920530
GI number: 238920530
Start: 2535193
End: 2536395
Strand: Reverse
Name: cinA [C]
Synonym: NT01EI_2642
Alternate gene names: 238920530
Gene position: 2536395-2535193 (Counterclockwise)
Preceding gene: 238920533
Following gene: 238920528
Centisome position: 66.53
GC content: 67.5
Gene sequence:
>1203_bases ATGTTACGAGTTGAGATGTTGAGCAGCGGTGATGAGGTACTGCATGGCCATATCCTGGATAGCAACGCGGCCTGGCTGGG GCGCTGGTTGTTTGAGCACGGTGTGCCGCTGTGCGGCCGCGCGACGGTGGGCGATGAGATTGCGGCGCTGTGCACGGCGA TAGAGGGCGCCGCTCGCCGCGCTGACGTGCTGATCGTCAACGGCGGCCTGGGGCCGACCAGTGACGATCTCAGTACGCAG GCGGCAGCTCAGGTGCTGGGTGTGGCGCTGGAGGAGAGCAGCGCCTGGATGGCGCGGATGCAGGCGTGGTTCGCCCGGCG CGGACGAAGTATGCCTCTCAGCAACCGCAAGCAGGCCTGGCTGCCGAGCGGGGCTGAGGTGCTGGATAACCCGATCGGCA CCGCCTGCGGCTTTGCCGTTACGCTGCATGAGTGTGTTATTTTCTTTACACCCGGCGTGCCCAGCGAGTTTATGCTGATG GTCGAGCAGCAGATCCTGCCGCGCCTGCGGCAGCGCTTTCGTTTGCCGCCGCCGCCGCTGTGCCTGCGATTGAGCACCTT TGGCCGCTCCGAGAGCGCTCTGGCTGAACAGCTGGAGACGCTGGTGCTACCGTCCGACTGCACGCTGGGCTACCGCTCCG CGTCACCGATCATCGAGCTGAAGCTGACCGGTCCCGCCGGGCAGGCGGCGGCGATGGAGGTGGCCTGGGCCCGGATCCGC ACCGCGGTGGCGGAAAACCTGCTGTTTGACGGATGCGACGGCGTCGCCGTGCGAGCCGCTGCCGCGTTGCGGCATGCGGG CGTCAGGCTGGCGCTGAGCGAACAGTTCAGCGCCGGACTGATCCACTGTTGGCTGCGGGCGGCGGATGCGCCGCTGGTGA ACGGTGAGCTGCTGGCGCATGAGGGGCATCCGACGCTGGAGCAGGTGATGGGCCGGGCGCGGATGCTCTCCGCCAGCCGT GCGGGAGCGCTGACGCTGGCCAGCGGTGAACTGCTGGAGGATACTCTGACGCTGGCGCTGCATACCCCGCAGGGGAGCTT TGGCCAGACGCTGTGTTTTCCCTCCGCCCGCCATAGTCAGGCGCTGCGCCGGGAGGCGTGCGCGACGCTGGCGCTGGATA TGCTGTGCCGCTATCTGGACGGGCGATCGCCCTTTGGTCGCTATGAGTGGCCGCGCTGTGTGGAACGGCGGGAGGAGGTC TAG
Upstream 100 bases:
>100_bases GGGCCATCGATGCCGGATCACCAGCGACGGTGCTGGGGGAGGTCTTGTGCATCGGTCTGACACTTTCTAAAGTGGGAGAA GACCTGAAACGGAGTGAAAT
Downstream 100 bases:
>100_bases AGCGCATAGGGATGCCGCCTAGCCGAGCCGCTGCAGCACCTGCTCAATCGCTGCGCGTAGCCGTACCCGATCGTGGCGGT AGGTTATATCATCGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MLRVEMLSSGDEVLHGHILDSNAAWLGRWLFEHGVPLCGRATVGDEIAALCTAIEGAARRADVLIVNGGLGPTSDDLSTQ AAAQVLGVALEESSAWMARMQAWFARRGRSMPLSNRKQAWLPSGAEVLDNPIGTACGFAVTLHECVIFFTPGVPSEFMLM VEQQILPRLRQRFRLPPPPLCLRLSTFGRSESALAEQLETLVLPSDCTLGYRSASPIIELKLTGPAGQAAAMEVAWARIR TAVAENLLFDGCDGVAVRAAAALRHAGVRLALSEQFSAGLIHCWLRAADAPLVNGELLAHEGHPTLEQVMGRARMLSASR AGALTLASGELLEDTLTLALHTPQGSFGQTLCFPSARHSQALRREACATLALDMLCRYLDGRSPFGRYEWPRCVERREEV
Sequences:
>Translated_400_residues MLRVEMLSSGDEVLHGHILDSNAAWLGRWLFEHGVPLCGRATVGDEIAALCTAIEGAARRADVLIVNGGLGPTSDDLSTQ AAAQVLGVALEESSAWMARMQAWFARRGRSMPLSNRKQAWLPSGAEVLDNPIGTACGFAVTLHECVIFFTPGVPSEFMLM VEQQILPRLRQRFRLPPPPLCLRLSTFGRSESALAEQLETLVLPSDCTLGYRSASPIIELKLTGPAGQAAAMEVAWARIR TAVAENLLFDGCDGVAVRAAAALRHAGVRLALSEQFSAGLIHCWLRAADAPLVNGELLAHEGHPTLEQVMGRARMLSASR AGALTLASGELLEDTLTLALHTPQGSFGQTLCFPSARHSQALRREACATLALDMLCRYLDGRSPFGRYEWPRCVERREEV >Mature_400_residues MLRVEMLSSGDEVLHGHILDSNAAWLGRWLFEHGVPLCGRATVGDEIAALCTAIEGAARRADVLIVNGGLGPTSDDLSTQ AAAQVLGVALEESSAWMARMQAWFARRGRSMPLSNRKQAWLPSGAEVLDNPIGTACGFAVTLHECVIFFTPGVPSEFMLM VEQQILPRLRQRFRLPPPPLCLRLSTFGRSESALAEQLETLVLPSDCTLGYRSASPIIELKLTGPAGQAAAMEVAWARIR TAVAENLLFDGCDGVAVRAAAALRHAGVRLALSEQFSAGLIHCWLRAADAPLVNGELLAHEGHPTLEQVMGRARMLSASR AGALTLASGELLEDTLTLALHTPQGSFGQTLCFPSARHSQALRREACATLALDMLCRYLDGRSPFGRYEWPRCVERREEV
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=399, Percent_Identity=50.3759398496241, Blast_Score=384, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6323832, Length=173, Percent_Identity=25.4335260115607, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008135 - InterPro: IPR020817 - InterPro: IPR001453 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 43269; Mature: 43269
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVEMLSSGDEVLHGHILDSNAAWLGRWLFEHGVPLCGRATVGDEIAALCTAIEGAARR CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC ADVLIVNGGLGPTSDDLSTQAAAQVLGVALEESSAWMARMQAWFARRGRSMPLSNRKQAW CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPSGAEVLDNPIGTACGFAVTLHECVIFFTPGVPSEFMLMVEQQILPRLRQRFRLPPPPL CCCCHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC CLRLSTFGRSESALAEQLETLVLPSDCTLGYRSASPIIELKLTGPAGQAAAMEVAWARIR EEEEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH TAVAENLLFDGCDGVAVRAAAALRHAGVRLALSEQFSAGLIHCWLRAADAPLVNGELLAH HHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEE EGHPTLEQVMGRARMLSASRAGALTLASGELLEDTLTLALHTPQGSFGQTLCFPSARHSQ CCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHCEEEEEEECCCCCCCCEECCCCHHHHH ALRREACATLALDMLCRYLDGRSPFGRYEWPRCVERREEV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MLRVEMLSSGDEVLHGHILDSNAAWLGRWLFEHGVPLCGRATVGDEIAALCTAIEGAARR CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC ADVLIVNGGLGPTSDDLSTQAAAQVLGVALEESSAWMARMQAWFARRGRSMPLSNRKQAW CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPSGAEVLDNPIGTACGFAVTLHECVIFFTPGVPSEFMLMVEQQILPRLRQRFRLPPPPL CCCCHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC CLRLSTFGRSESALAEQLETLVLPSDCTLGYRSASPIIELKLTGPAGQAAAMEVAWARIR EEEEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH TAVAENLLFDGCDGVAVRAAAALRHAGVRLALSEQFSAGLIHCWLRAADAPLVNGELLAH HHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEE EGHPTLEQVMGRARMLSASRAGALTLASGELLEDTLTLALHTPQGSFGQTLCFPSARHSQ CCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHCEEEEEEECCCCCCCCEECCCCHHHHH ALRREACATLALDMLCRYLDGRSPFGRYEWPRCVERREEV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA