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The map label for this gene is wrbA [H]

Identifier: 238920524

GI number: 238920524

Start: 2530935

End: 2531576

Strand: Reverse

Name: wrbA [H]

Synonym: NT01EI_2636

Alternate gene names: 238920524

Gene position: 2531576-2530935 (Counterclockwise)

Preceding gene: 238920525

Following gene: 238920523

Centisome position: 66.41

GC content: 63.08

Gene sequence:

>642_bases
GTGGATTTCCCGCCGGAGCTGGCCTATAACTGTGGTGATTATCCGTGGATAAAAGGAGTCGGGATCATGGCAGTCATCGT
TATTGTGTATCACAGCGGCTATGGACACACCGCGCGTGCGGCGGAGGCCGTGGCACAGGGGGCCCGGGCCGGCGCTCAGG
TCAGCCTGCTGCCCATCGACAGCGAGGGCAATCTCCCTGCCCAGGGCTGGGAGCAGCTGGCGGGGGCCGATGCTATCATC
ATGGGCTCGCCGACCTATATGGGCGGTCCCTCCTGGCAGTTCAAAAAATTCGCCGACGCCTCCTCCAAGCCCTGGTTCAG
CCAGAGCTGGAAGGATAAGCTGTTTGCCGGCTTCACCAATTCGGCCAGTATGAACGGCGATAAGCTCTCCACCCTCGATT
ATCTGTTTCACCTGTCTCAGCAGCACGGCGGACTGTGGGTGGGGATGGGGATGCTGCCGTCCAACGGTAAGGCGGCCCAG
CGTAATGATGTGAACTACATCGCCGGGTTTTCCGGGCTGATGACCGTGTCGCCCTCCGATGCCACCCCGGATGAGGCTCC
GCTGTCGGGTGATCTGGAGACGGCGCGCCGCTTCGGCGCCCGGGTCGCCGCAGTGGCCCTGCGCTGGCGTACACCGGCGT
AA

Upstream 100 bases:

>100_bases
GGAGACCTCGGAGGGGGCCGATCGCTGGGTCGATGCCCGCGACAGCGATCGCCAGGCGGCCGAGCGCTGGTAGCGCCGAT
ACGCAGCGAATGCCGCTGAC

Downstream 100 bases:

>100_bases
GCCTTGCTGTACGCCGTCAACGCCGCGATGCGCCGACGTGTGACATAATTGTTTGAGCGAGATCGCATTTTTTTATGTTA
GGCTTAAGTGAGTGACATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDFPPELAYNCGDYPWIKGVGIMAVIVIVYHSGYGHTARAAEAVAQGARAGAQVSLLPIDSEGNLPAQGWEQLAGADAII
MGSPTYMGGPSWQFKKFADASSKPWFSQSWKDKLFAGFTNSASMNGDKLSTLDYLFHLSQQHGGLWVGMGMLPSNGKAAQ
RNDVNYIAGFSGLMTVSPSDATPDEAPLSGDLETARRFGARVAAVALRWRTPA

Sequences:

>Translated_213_residues
MDFPPELAYNCGDYPWIKGVGIMAVIVIVYHSGYGHTARAAEAVAQGARAGAQVSLLPIDSEGNLPAQGWEQLAGADAII
MGSPTYMGGPSWQFKKFADASSKPWFSQSWKDKLFAGFTNSASMNGDKLSTLDYLFHLSQQHGGLWVGMGMLPSNGKAAQ
RNDVNYIAGFSGLMTVSPSDATPDEAPLSGDLETARRFGARVAAVALRWRTPA
>Mature_213_residues
MDFPPELAYNCGDYPWIKGVGIMAVIVIVYHSGYGHTARAAEAVAQGARAGAQVSLLPIDSEGNLPAQGWEQLAGADAII
MGSPTYMGGPSWQFKKFADASSKPWFSQSWKDKLFAGFTNSASMNGDKLSTLDYLFHLSQQHGGLWVGMGMLPSNGKAAQ
RNDVNYIAGFSGLMTVSPSDATPDEAPLSGDLETARRFGARVAAVALRWRTPA

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787239, Length=205, Percent_Identity=28.2926829268293, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 22748; Mature: 22748

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFPPELAYNCGDYPWIKGVGIMAVIVIVYHSGYGHTARAAEAVAQGARAGAQVSLLPID
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC
SEGNLPAQGWEQLAGADAIIMGSPTYMGGPSWQFKKFADASSKPWFSQSWKDKLFAGFTN
CCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCC
SASMNGDKLSTLDYLFHLSQQHGGLWVGMGMLPSNGKAAQRNDVNYIAGFSGLMTVSPSD
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCC
ATPDEAPLSGDLETARRFGARVAAVALRWRTPA
CCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCC
>Mature Secondary Structure
MDFPPELAYNCGDYPWIKGVGIMAVIVIVYHSGYGHTARAAEAVAQGARAGAQVSLLPID
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC
SEGNLPAQGWEQLAGADAIIMGSPTYMGGPSWQFKKFADASSKPWFSQSWKDKLFAGFTN
CCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCC
SASMNGDKLSTLDYLFHLSQQHGGLWVGMGMLPSNGKAAQRNDVNYIAGFSGLMTVSPSD
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCC
ATPDEAPLSGDLETARRFGARVAAVALRWRTPA
CCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA