| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is rhlE [H]
Identifier: 238920509
GI number: 238920509
Start: 2507758
End: 2509080
Strand: Reverse
Name: rhlE [H]
Synonym: NT01EI_2621
Alternate gene names: 238920509
Gene position: 2509080-2507758 (Counterclockwise)
Preceding gene: 238920517
Following gene: 238920507
Centisome position: 65.82
GC content: 63.42
Gene sequence:
>1323_bases ATGTCTTTTGATTCCCTTGGCCTGTGTGCCGAACTGTTACGCGCTGTGGAAGAGCAGGGCTATCGTGAGCCCACCCCGAT CCAACAGCAGGCCATTCCCGTGGTGCTGCAGCGTCGCGATCTGATGGCCAGCGCCCAGACCGGCACCGGTAAGACAGCCG GCTTTACCCTGCCGTTGCTGCAGCTGCTGCACCAGAACCCGAAAAGTGGTAAAGGACGTCGCCCGGTACGGGCGCTGATC CTGACGCCAACCCGCGAGCTGGCGGCGCAGATCGGTGAAAACGTACGCGAGTACAGCCGCCATCTGCCGTTGCGGTCACT GGTGGTGTTCGGTGGCGTGAGCATTAACCCGCAGATGATGAAGCTGCGTGGCGGCGTGGATGTGCTGGTGGCGACGCCGG GGCGCCTGCTGGATCTGGCCCATCAGAATGCGGTGGATCTGTCTCAGGTCGAGATCCTGGTGCTGGATGAAGCCGACCGG ATGCTGGATATGGGCTTTATCCACGATATCCGCCGCGTGCTGGCCCGTCTGCCGGCCAAACGGCAAAACCTGCTGTTTTC CGCCACCTTCTCCGATGAGATCAAGGCGCTGGCAGCCTCACTGCTGCATAACCCGGCCGAGGTGGAAGTGGCGCGCCGCA ATACCGCGTCAGAGCTGGTGACCCAACACGTGCATCTGGTGGATAAGAAGCGTAAGCGTGAGCTGCTCTCTTTTCTGATC GGCACCCGGGATTGGCGTCAGGTGCTGGTTTTCACCCGAACCAAGTACGGTGCCAACCACCTGGCGGAGCAGCTGAATAA AGACGGCATCAGCGCGGCGGCGATCCACGGCAACAAAAGCCAGGGGGCGCGTACCCGCGCGCTGGCGGACTTTAAGAGCG GTGATATTCGGGTGCTGGTGGCGACGGATATCGCCGCGCGCGGCCTGGATATCGATCAGCTGCCCTATGTGGTGAACTAT GAGCTGCCCAACGTGCCGGAGGACTACGTGCACCGTATCGGCCGCACCGGGCGGGCCCAGGCAACCGGTGAGGCGCTGTC GCTGGTCTGCGTGGATGAGCATAAGCTGCTGCGCGATATTGAACGTCTGCTGAAGCGTCCGATTCCGCGCATGGCCATTG CGGGCTATGAGCCGGATCCGAGTATTAAGGCCGAGCCAATTCAGAATGGCCGCCAGGGTGGACGCCAGAACAGCGGTCGT ACGGAACGTTCGGGGCAGGGGCGCCGCGCAGAGGGACAGCGCAGCACCGCGCCGCGTCAGGGGCAAAACCGCCGCCCGCG CCGTCCGGCTGAGCAGGGTAAGGGGCGTACCGAGGGGCGCTGA
Upstream 100 bases:
>100_bases GTGCCTGTCCTCGTGGTAATTCTTGCTTTGCCTCGTCTGATACGCCTGTCCGGAAACTGCATCCCTGTAGCACAGGGAGC GGGCAGGTCTGGAGTTTTTC
Downstream 100 bases:
>100_bases GCCATACGGCGACTCAGGATAACCCGTCGCGGAGACAGTAGAGAGACTGTGTCTGCGACGGGCCGATCGGCGCCGCCGCT CAGGCGGCGCGATCCAAGGG
Product: ATP-dependent RNA helicase RhlE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSFDSLGLCAELLRAVEEQGYREPTPIQQQAIPVVLQRRDLMASAQTGTGKTAGFTLPLLQLLHQNPKSGKGRRPVRALI LTPTRELAAQIGENVREYSRHLPLRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLAHQNAVDLSQVEILVLDEADR MLDMGFIHDIRRVLARLPAKRQNLLFSATFSDEIKALAASLLHNPAEVEVARRNTASELVTQHVHLVDKKRKRELLSFLI GTRDWRQVLVFTRTKYGANHLAEQLNKDGISAAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIDQLPYVVNY ELPNVPEDYVHRIGRTGRAQATGEALSLVCVDEHKLLRDIERLLKRPIPRMAIAGYEPDPSIKAEPIQNGRQGGRQNSGR TERSGQGRRAEGQRSTAPRQGQNRRPRRPAEQGKGRTEGR
Sequences:
>Translated_440_residues MSFDSLGLCAELLRAVEEQGYREPTPIQQQAIPVVLQRRDLMASAQTGTGKTAGFTLPLLQLLHQNPKSGKGRRPVRALI LTPTRELAAQIGENVREYSRHLPLRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLAHQNAVDLSQVEILVLDEADR MLDMGFIHDIRRVLARLPAKRQNLLFSATFSDEIKALAASLLHNPAEVEVARRNTASELVTQHVHLVDKKRKRELLSFLI GTRDWRQVLVFTRTKYGANHLAEQLNKDGISAAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIDQLPYVVNY ELPNVPEDYVHRIGRTGRAQATGEALSLVCVDEHKLLRDIERLLKRPIPRMAIAGYEPDPSIKAEPIQNGRQGGRQNSGR TERSGQGRRAEGQRSTAPRQGQNRRPRRPAEQGKGRTEGR >Mature_439_residues SFDSLGLCAELLRAVEEQGYREPTPIQQQAIPVVLQRRDLMASAQTGTGKTAGFTLPLLQLLHQNPKSGKGRRPVRALIL TPTRELAAQIGENVREYSRHLPLRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLAHQNAVDLSQVEILVLDEADRM LDMGFIHDIRRVLARLPAKRQNLLFSATFSDEIKALAASLLHNPAEVEVARRNTASELVTQHVHLVDKKRKRELLSFLIG TRDWRQVLVFTRTKYGANHLAEQLNKDGISAAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIDQLPYVVNYE LPNVPEDYVHRIGRTGRAQATGEALSLVCVDEHKLLRDIERLLKRPIPRMAIAGYEPDPSIKAEPIQNGRQGGRQNSGRT ERSGQGRRAEGQRSTAPRQGQNRRPRRPAEQGKGRTEGR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=388, Percent_Identity=41.4948453608247, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI301171475, Length=388, Percent_Identity=41.4948453608247, Blast_Score=272, Evalue=4e-73, Organism=Homo sapiens, GI87196351, Length=388, Percent_Identity=41.4948453608247, Blast_Score=272, Evalue=4e-73, Organism=Homo sapiens, GI216548263, Length=394, Percent_Identity=39.0862944162437, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI262118318, Length=394, Percent_Identity=39.0862944162437, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI262231852, Length=394, Percent_Identity=39.0862944162437, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI13518015, Length=394, Percent_Identity=39.0862944162437, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI169881239, Length=388, Percent_Identity=40.979381443299, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI13514809, Length=388, Percent_Identity=40.979381443299, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI224593278, Length=373, Percent_Identity=40.2144772117962, Blast_Score=267, Evalue=1e-71, Organism=Homo sapiens, GI55749865, Length=365, Percent_Identity=39.1780821917808, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI41327773, Length=368, Percent_Identity=38.8586956521739, Blast_Score=261, Evalue=7e-70, Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=39.8373983739837, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI41327771, Length=400, Percent_Identity=37.25, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI4758138, Length=373, Percent_Identity=37.2654155495979, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=41.4438502673797, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI148613856, Length=369, Percent_Identity=35.7723577235772, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI38201710, Length=369, Percent_Identity=35.7723577235772, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=38.7978142076503, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=38.7978142076503, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=38.7533875338753, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=37.5, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI20149629, Length=369, Percent_Identity=35.230352303523, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=35.8490566037736, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=37.2282608695652, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=37.2282608695652, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI164664518, Length=393, Percent_Identity=33.3333333333333, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI38569505, Length=381, Percent_Identity=34.9081364829396, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI38569503, Length=381, Percent_Identity=34.9081364829396, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI41327776, Length=369, Percent_Identity=32.7913279132791, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI38327634, Length=372, Percent_Identity=36.2903225806452, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=32.7956989247312, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=32.5268817204301, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=33.7765957446808, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=33.3333333333333, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=32.7868852459016, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=32.7868852459016, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI41327779, Length=392, Percent_Identity=33.9285714285714, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI50659095, Length=366, Percent_Identity=32.5136612021858, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI13129006, Length=373, Percent_Identity=32.171581769437, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI17505907, Length=415, Percent_Identity=30.3614457831325, Blast_Score=178, Evalue=8e-45, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=33.5276967930029, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=30.6532663316583, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI8922886, Length=360, Percent_Identity=32.5, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI6005743, Length=360, Percent_Identity=31.9444444444444, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=31.3829787234043, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI256223453, Length=386, Percent_Identity=30.3108808290155, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI62241022, Length=342, Percent_Identity=31.5789473684211, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI62241024, Length=321, Percent_Identity=31.4641744548287, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI9966805, Length=327, Percent_Identity=31.1926605504587, Blast_Score=141, Evalue=9e-34, Organism=Homo sapiens, GI154759257, Length=458, Percent_Identity=28.1659388646288, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI256773275, Length=417, Percent_Identity=32.1342925659472, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI20336298, Length=357, Percent_Identity=28.8515406162465, Blast_Score=125, Evalue=9e-29, Organism=Escherichia coli, GI1787016, Length=389, Percent_Identity=86.6323907455013, Blast_Score=682, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=41.1140583554377, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI1790214, Length=381, Percent_Identity=38.8451443569554, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1788930, Length=366, Percent_Identity=39.8907103825137, Blast_Score=234, Evalue=8e-63, Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=40.1129943502825, Blast_Score=227, Evalue=1e-60, Organism=Escherichia coli, GI48994977, Length=375, Percent_Identity=24, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI32565321, Length=392, Percent_Identity=39.2857142857143, Blast_Score=272, Evalue=3e-73, Organism=Caenorhabditis elegans, GI17510307, Length=377, Percent_Identity=41.3793103448276, Blast_Score=265, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17510309, Length=377, Percent_Identity=41.3793103448276, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI71995514, Length=377, Percent_Identity=41.3793103448276, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI115533224, Length=417, Percent_Identity=35.7314148681055, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=39.8416886543536, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI86570094, Length=388, Percent_Identity=37.3711340206186, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=37.6288659793814, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=36.1185983827493, Blast_Score=240, Evalue=9e-64, Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=35.8490566037736, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17552114, Length=377, Percent_Identity=33.9522546419098, Blast_Score=239, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17555296, Length=412, Percent_Identity=34.9514563106796, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71987143, Length=372, Percent_Identity=35.2150537634409, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17537549, Length=377, Percent_Identity=36.3395225464191, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17507945, Length=375, Percent_Identity=38.9333333333333, Blast_Score=224, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=35.752688172043, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=34.7826086956522, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=34.7826086956522, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17507881, Length=386, Percent_Identity=35.7512953367876, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=34.375, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17552642, Length=382, Percent_Identity=33.5078534031414, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=32.1989528795811, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI115532546, Length=381, Percent_Identity=32.2834645669291, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17509811, Length=378, Percent_Identity=32.5396825396825, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17505370, Length=356, Percent_Identity=37.3595505617978, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=32.1022727272727, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71990816, Length=381, Percent_Identity=32.0209973753281, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=30.7894736842105, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI193208216, Length=406, Percent_Identity=31.5270935960591, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=30.3724928366762, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=30.4239401496259, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=30.4239401496259, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=30.4239401496259, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17556951, Length=352, Percent_Identity=32.9545454545455, Blast_Score=154, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=31.4285714285714, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI25148203, Length=423, Percent_Identity=23.8770685579196, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=29.6407185628743, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=30.6666666666667, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=27.8236914600551, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982862, Length=197, Percent_Identity=32.48730964467, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=26.7217630853994, Blast_Score=104, Evalue=7e-23, Organism=Caenorhabditis elegans, GI25148205, Length=357, Percent_Identity=22.4089635854342, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71987152, Length=107, Percent_Identity=37.3831775700935, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6325138, Length=378, Percent_Identity=42.0634920634921, Blast_Score=274, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=40.9090909090909, Blast_Score=266, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6321360, Length=384, Percent_Identity=41.1458333333333, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=40.2116402116402, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=37.9679144385027, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=36.0881542699724, Blast_Score=245, Evalue=9e-66, Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=33.8666666666667, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6320173, Length=423, Percent_Identity=36.1702127659575, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=389, Percent_Identity=34.7043701799486, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=411, Percent_Identity=32.6034063260341, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=33.6986301369863, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6324620, Length=359, Percent_Identity=35.6545961002786, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=32.7027027027027, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=32.7027027027027, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=31.7708333333333, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=376, Percent_Identity=33.7765957446808, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=30.6878306878307, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=380, Percent_Identity=32.1052631578947, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=29.4594594594595, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=444, Percent_Identity=28.6036036036036, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=29.8288508557457, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=413, Percent_Identity=30.2663438256659, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=453, Percent_Identity=26.2693156732892, Blast_Score=146, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=368, Percent_Identity=25.2717391304348, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6322876, Length=223, Percent_Identity=32.7354260089686, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6321374, Length=191, Percent_Identity=30.8900523560209, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI18857967, Length=437, Percent_Identity=36.3844393592677, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=38.0102040816327, Blast_Score=271, Evalue=9e-73, Organism=Drosophila melanogaster, GI24642151, Length=367, Percent_Identity=38.6920980926431, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=42.2857142857143, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI17985987, Length=393, Percent_Identity=40.9669211195929, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=39.2757660167131, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI28574962, Length=369, Percent_Identity=37.6693766937669, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24644479, Length=359, Percent_Identity=37.0473537604457, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI24644483, Length=359, Percent_Identity=37.0473537604457, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI281361218, Length=359, Percent_Identity=37.0473537604457, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644481, Length=359, Percent_Identity=37.0473537604457, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644487, Length=359, Percent_Identity=37.0473537604457, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI45551833, Length=359, Percent_Identity=37.0473537604457, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644485, Length=359, Percent_Identity=37.0473537604457, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI28575014, Length=371, Percent_Identity=37.466307277628, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI17977678, Length=382, Percent_Identity=37.9581151832461, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24585582, Length=369, Percent_Identity=36.5853658536585, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=37.6021798365123, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI21356161, Length=397, Percent_Identity=38.5390428211587, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24583279, Length=372, Percent_Identity=34.4086021505376, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=34.4086021505376, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=34.7708894878706, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=34.2318059299191, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=34.2318059299191, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=34.2318059299191, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=34.2318059299191, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=36.741214057508, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI17136814, Length=370, Percent_Identity=37.027027027027, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI28571808, Length=368, Percent_Identity=36.1413043478261, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI28571809, Length=368, Percent_Identity=36.1413043478261, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=36.6666666666667, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=35.5614973262032, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=30.6010928961749, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=30.6010928961749, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=30.6010928961749, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=31.3829787234043, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI20130173, Length=429, Percent_Identity=28.6713286713287, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI17647335, Length=413, Percent_Identity=27.1186440677966, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI24643725, Length=402, Percent_Identity=29.6019900497512, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=28.9124668435013, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=31.6923076923077, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI19920478, Length=357, Percent_Identity=31.6526610644258, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI17136666, Length=409, Percent_Identity=29.0953545232274, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=33.9366515837104, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=33.9366515837104, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48813; Mature: 48682
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDSLGLCAELLRAVEEQGYREPTPIQQQAIPVVLQRRDLMASAQTGTGKTAGFTLPLL CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH QLLHQNPKSGKGRRPVRALILTPTRELAAQIGENVREYSRHLPLRSLVVFGGVSINPQMM HHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHH KLRGGVDVLVATPGRLLDLAHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLARLPAK EECCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC RQNLLFSATFSDEIKALAASLLHNPAEVEVARRNTASELVTQHVHLVDKKRKRELLSFLI HHCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTRDWRQVLVFTRTKYGANHLAEQLNKDGISAAAIHGNKSQGARTRALADFKSGDIRVLV CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEE ATDIAARGLDIDQLPYVVNYELPNVPEDYVHRIGRTGRAQATGEALSLVCVDEHKLLRDI EECHHHCCCCHHHCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHH ERLLKRPIPRMAIAGYEPDPSIKAEPIQNGRQGGRQNSGRTERSGQGRRAEGQRSTAPRQ HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GQNRRPRRPAEQGKGRTEGR CCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure SFDSLGLCAELLRAVEEQGYREPTPIQQQAIPVVLQRRDLMASAQTGTGKTAGFTLPLL CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH QLLHQNPKSGKGRRPVRALILTPTRELAAQIGENVREYSRHLPLRSLVVFGGVSINPQMM HHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHH KLRGGVDVLVATPGRLLDLAHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLARLPAK EECCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC RQNLLFSATFSDEIKALAASLLHNPAEVEVARRNTASELVTQHVHLVDKKRKRELLSFLI HHCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTRDWRQVLVFTRTKYGANHLAEQLNKDGISAAAIHGNKSQGARTRALADFKSGDIRVLV CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEE ATDIAARGLDIDQLPYVVNYELPNVPEDYVHRIGRTGRAQATGEALSLVCVDEHKLLRDI EECHHHCCCCHHHCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHH ERLLKRPIPRMAIAGYEPDPSIKAEPIQNGRQGGRQNSGRTERSGQGRRAEGQRSTAPRQ HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GQNRRPRRPAEQGKGRTEGR CCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]