| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238920503
Identifier: 238920503
GI number: 238920503
Start: 2504137
End: 2504337
Strand: Reverse
Name: 238920503
Synonym: NT01EI_2615
Alternate gene names: NA
Gene position: 2504337-2504137 (Counterclockwise)
Preceding gene: 238920504
Following gene: 238920502
Centisome position: 65.69
GC content: 57.71
Gene sequence:
>201_bases ATGACTGACTATTTATGCAGCGCTGCTGGATGTGTTTCCCATTGTGCTGCTGAAGGATGGGCTGGCGGAAAACGACTGGG AGGGGGGCACCTGAATGCCCGCCAGGGACAGCGGATTGAGCGGGTGGGTGACGATCTGTTTGTCACCAACGTACGCTATA TCCAGCGCGGTATTGATGAGGCGCGGCCAATGCGGCGTTGA
Upstream 100 bases:
>100_bases GCGAGGATATTGTGATCTGCAGGCTCCGGCGTCCAGTGAGTTCTATCAGGATGGGTGATACTCTCTGCCAAGCGAAGGGT GTCGGCTCGATGCATAGGAG
Downstream 100 bases:
>100_bases TTAAGCTGAATCAGATCGGCAGCCTGAGTGAGACCATCGCCGCAGTACAGTTGTGTCATAGCCATGGCTGGGGTGCCTTT ATCTTCCACCGCAGTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MTDYLCSAAGCVSHCAAEGWAGGKRLGGGHLNARQGQRIERVGDDLFVTNVRYIQRGIDEARPMRR
Sequences:
>Translated_66_residues MTDYLCSAAGCVSHCAAEGWAGGKRLGGGHLNARQGQRIERVGDDLFVTNVRYIQRGIDEARPMRR >Mature_65_residues TDYLCSAAGCVSHCAAEGWAGGKRLGGGHLNARQGQRIERVGDDLFVTNVRYIQRGIDEARPMRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7248; Mature: 7117
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYLCSAAGCVSHCAAEGWAGGKRLGGGHLNARQGQRIERVGDDLFVTNVRYIQRGIDE CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH ARPMRR CCCCCC >Mature Secondary Structure TDYLCSAAGCVSHCAAEGWAGGKRLGGGHLNARQGQRIERVGDDLFVTNVRYIQRGIDE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH ARPMRR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA