| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yecH [H]
Identifier: 238920494
GI number: 238920494
Start: 2496583
End: 2496825
Strand: Direct
Name: yecH [H]
Synonym: NT01EI_2605
Alternate gene names: 238920494
Gene position: 2496583-2496825 (Clockwise)
Preceding gene: 238920488
Following gene: 238920495
Centisome position: 65.49
GC content: 59.26
Gene sequence:
>243_bases ATGTCTGCATCCATTCACGGCCATGACGTCATGCATATGATGCTTTCCAGCGACACGACCTATACCCGCGACACCCTGAT CGCCGCCATTGACCGGCGCTTCGGTGCCAATGCCCGTTTTCACACCTGCTCTGCCGAGGATCTCAACGCCGCCGGGCTGG TGGATCTGCTGGCCAAGCGCGGTAAGTTTGTCCCCGCCGAAGGTGGCTTTATCACCCGCGCAGATAAAATCTGCCGCCAC TGA
Upstream 100 bases:
>100_bases AAGCGATGCGATAGGCTGGATCTCGCACGCCCGATGAGTAAACTGGAACCCGTCCGCAGTGCGGGCACCCTATTCCCCCC TTCCAGCCAGAGGTTATATT
Downstream 100 bases:
>100_bases TGGCCTTTACCCTGCGGCCATACCAGCGTGAGGCTGTCGATGCCACGCTGGCCCACTTCCGGCGCCACCGGGAACCGGCG CTGATCGTTCTGCCGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSASIHGHDVMHMMLSSDTTYTRDTLIAAIDRRFGANARFHTCSAEDLNAAGLVDLLAKRGKFVPAEGGFITRADKICRH
Sequences:
>Translated_80_residues MSASIHGHDVMHMMLSSDTTYTRDTLIAAIDRRFGANARFHTCSAEDLNAAGLVDLLAKRGKFVPAEGGFITRADKICRH >Mature_79_residues SASIHGHDVMHMMLSSDTTYTRDTLIAAIDRRFGANARFHTCSAEDLNAAGLVDLLAKRGKFVPAEGGFITRADKICRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788217, Length=77, Percent_Identity=57.1428571428571, Blast_Score=95, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019620 [H]
Pfam domain/function: PF10678 DUF2492 [H]
EC number: NA
Molecular weight: Translated: 8762; Mature: 8631
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASIHGHDVMHMMLSSDTTYTRDTLIAAIDRRFGANARFHTCSAEDLNAAGLVDLLAKR CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHC GKFVPAEGGFITRADKICRH CCCCCCCCCEEECHHHHHCC >Mature Secondary Structure SASIHGHDVMHMMLSSDTTYTRDTLIAAIDRRFGANARFHTCSAEDLNAAGLVDLLAKR CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHC GKFVPAEGGFITRADKICRH CCCCCCCCCEEECHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]