| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238920491
Identifier: 238920491
GI number: 238920491
Start: 2495080
End: 2495253
Strand: Reverse
Name: 238920491
Synonym: NT01EI_2602
Alternate gene names: NA
Gene position: 2495253-2495080 (Counterclockwise)
Preceding gene: 238920492
Following gene: 238920490
Centisome position: 65.45
GC content: 62.64
Gene sequence:
>174_bases ATGATCTCGTTGGTGGCACTGGTTATGACCTGCGCCCCGTTGCCGGGCGGTGCGTTGATGCTGCGGTTTAGCTGGCACGC CATTTTATGGGCGATGGCGCTGCTGGTGGCCTTGTTTATCCGGAAGACGCTGTCGCGTGCGCGGCGTCAGCCATTCCGGC TGTGGCCACCCTGA
Upstream 100 bases:
>100_bases CTGGTGCACTGCATCGTTCTGCTGGCCTGCTGTGGCCGTTGCCCGTGCGGTGATCAATGCCCTGATATGCGAGATGTTCA GTAAGGATAAATTTTCGCGC
Downstream 100 bases:
>100_bases CCCATTTCGCCGCTCAGTTCCGCCATTTTCGCGCGTTGTGCTATATCTGACCCGCGGGTTCCTCTTCTCCGGGACGTTTT TTCAGCGCGTGCCCCTTTGT
Product: bicyclomycin resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MISLVALVMTCAPLPGGALMLRFSWHAILWAMALLVALFIRKTLSRARRQPFRLWPP
Sequences:
>Translated_57_residues MISLVALVMTCAPLPGGALMLRFSWHAILWAMALLVALFIRKTLSRARRQPFRLWPP >Mature_57_residues MISLVALVMTCAPLPGGALMLRFSWHAILWAMALLVALFIRKTLSRARRQPFRLWPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6490; Mature: 6490
Theoretical pI: Translated: 12.80; Mature: 12.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLVALVMTCAPLPGGALMLRFSWHAILWAMALLVALFIRKTLSRARRQPFRLWPP CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MISLVALVMTCAPLPGGALMLRFSWHAILWAMALLVALFIRKTLSRARRQPFRLWPP CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA