| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is glnP [H]
Identifier: 238920485
GI number: 238920485
Start: 2489834
End: 2490490
Strand: Direct
Name: glnP [H]
Synonym: NT01EI_2596
Alternate gene names: 238920485
Gene position: 2489834-2490490 (Clockwise)
Preceding gene: 238920484
Following gene: 238920486
Centisome position: 65.31
GC content: 59.97
Gene sequence:
>657_bases ATGCAGTTTGACTGGAGCACCATCTGGGATGCCATCCCGCTGCTGCTGGAAGGCGCCAAACTCACCCTCTGGATCTCGGT GCTGGGACTGCTCGGCGGCCTGATCATCGGCCTGGCCGCCGGTTTTGCGCGCGCCTTCGGCGGCTGGCTGAGCAACCACA TCGCCCTGGTGTTTATCGAGCTTATCCGTGGTACCCCCATCGTAGTGCAGGTGATGTTTATCTACTTCGCCCTACCGATG ATGATGCCGCTGCGCATCGACCCTTTCAGCGCTGCCATTATCACGATCATGATCAACTCCGGCGCCTATATCGCCGAAAT CACCCGCGGCGCGGTGCTCTCCATTCACAGCGGCTTTCGCGAGGCGGGACTGGCTCTGGGCCTCTCCCGCCGCGATACCC TGCGCCATGTGATCATGCCGCTGGCGCTGCGTCGCATGCTGCCCCCGCTGGGGAACCAGTGGATCGTCAGCATCAAGGAC ACCTCGCTGTTCATCGTCATCGGCGTGGCCGAACTGACCCGTCAGGGACAGGAGATCATCGCCGGAAACTTCCGCGCCAT GGAAATCTGGAGCGCTGTCGCTGTGATCTATCTGATCATGACGCTGGCCCTGAGCTTTGTCCTACGCCGCCTGGAAAGAA GATTAAAAATTATATGA
Upstream 100 bases:
>100_bases CGGCGTCGAACCGAAGTAATGCTCTGGGCGCCCGCCGGGCGCCCCTTTGTCCTCACGGGCGTTGCACGGTAACAAATACG GTTTTACCAGGAGAATCAAC
Downstream 100 bases:
>100_bases TTGAATTTAAAAACGTCGATAAAAGCTTCGGACAGACCGCCGTTTTGCACGATATCAACCTGCGAATTCAGCCGGGTGAG GTAGTCGTGATCATCGGTCC
Product: glutamine ABC transporter permease protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MQFDWSTIWDAIPLLLEGAKLTLWISVLGLLGGLIIGLAAGFARAFGGWLSNHIALVFIELIRGTPIVVQVMFIYFALPM MMPLRIDPFSAAIITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRHVIMPLALRRMLPPLGNQWIVSIKD TSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRRLERRLKII
Sequences:
>Translated_218_residues MQFDWSTIWDAIPLLLEGAKLTLWISVLGLLGGLIIGLAAGFARAFGGWLSNHIALVFIELIRGTPIVVQVMFIYFALPM MMPLRIDPFSAAIITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRHVIMPLALRRMLPPLGNQWIVSIKD TSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRRLERRLKII >Mature_218_residues MQFDWSTIWDAIPLLLEGAKLTLWISVLGLLGGLIIGLAAGFARAFGGWLSNHIALVFIELIRGTPIVVQVMFIYFALPM MMPLRIDPFSAAIITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRHVIMPLALRRMLPPLGNQWIVSIKD TSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRRLERRLKII
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=219, Percent_Identity=84.9315068493151, Blast_Score=373, Evalue=1e-105, Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=36.5740740740741, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=30.3738317757009, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=28.6363636363636, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787087, Length=211, Percent_Identity=30.8056872037915, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=27.3148148148148, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=27.4038461538462, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=22.5352112676056, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=30.3921568627451, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=31.3432835820896, Blast_Score=71, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24184; Mature: 24184
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDWSTIWDAIPLLLEGAKLTLWISVLGLLGGLIIGLAAGFARAFGGWLSNHIALVFIE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRGTPIVVQVMFIYFALPMMMPLRIDPFSAAIITIMINSGAYIAEITRGAVLSIHSGFR HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCEEEHHHCCHHHHHHHHHH EAGLALGLSRRDTLRHVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEHHHHHHCCHHHH AGNFRAMEIWSAVAVIYLIMTLALSFVLRRLERRLKII HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFDWSTIWDAIPLLLEGAKLTLWISVLGLLGGLIIGLAAGFARAFGGWLSNHIALVFIE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRGTPIVVQVMFIYFALPMMMPLRIDPFSAAIITIMINSGAYIAEITRGAVLSIHSGFR HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCEEEHHHCCHHHHHHHHHH EAGLALGLSRRDTLRHVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEII HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEHHHHHHCCHHHH AGNFRAMEIWSAVAVIYLIMTLALSFVLRRLERRLKII HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]