| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is nudH [C]
Identifier: 238920482
GI number: 238920482
Start: 2488243
End: 2488671
Strand: Direct
Name: nudH [C]
Synonym: NT01EI_2593
Alternate gene names: 238920482
Gene position: 2488243-2488671 (Clockwise)
Preceding gene: 238920478
Following gene: 238920484
Centisome position: 65.27
GC content: 59.67
Gene sequence:
>429_bases ATGACGGTAAAAGTAGGGGTTGGGGTGATCATCGTGAACGCCGCTGGCCAGATTTTGCTCGGAAAACGCTGCGGCAGCCA CGCGCCCTACTGGTCTATCCCCGGCGGCCACGTTGAACAGGGAGAAACCTTTGAACAGACGGCGATACGTGAAGTGGCCG AGGAGTGTGGCCTGCACATCGATGCGCCGCGCTTCGTCGGCGTGACCAATAACCTGCGAACCTGGCATGACGAAGGGGTA CACAATGTCTCTGTCATTATGCAGGTCAGCGCACCAGCGGCGGCGGCCCCTCAACGCTGCGAGCCGGAGAAATGCGAACG CTGGCAATGGTGCGATCCACATCAGCTGCCGCAGCCTTGCTTTGACGCCTGTCAGCAGGGTGTTCAGCTGTGGCTTACCC GACAGACCTATTGTGCTACACCAGCCTAG
Upstream 100 bases:
>100_bases GTACATATTTTAGACCTTCAGCACATTTTTGCTGACGTTTGTTGTCAACACCGCTGACGTGCGACAATACGCGCTGAAAT GTGCTGATGGAGAAACAAGC
Downstream 100 bases:
>100_bases CAGCGCTGCGGTGTGGTCAAACCCGCACCGCTCCAGTGCACACACTCAGCTGAACAAAAATAAAGCAATATGAGTAAGAT AATATTCTCTCGCACCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; ADP-Ribose Pyrophosphatase MutT; MutT/NUDIX Family Protein; ADP-Ribose Pyrophosphatase; Mut Family Protein; MutT Protein; MutT-Family Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTVKVGVGVIIVNAAGQILLGKRCGSHAPYWSIPGGHVEQGETFEQTAIREVAEECGLHIDAPRFVGVTNNLRTWHDEGV HNVSVIMQVSAPAAAAPQRCEPEKCERWQWCDPHQLPQPCFDACQQGVQLWLTRQTYCATPA
Sequences:
>Translated_142_residues MTVKVGVGVIIVNAAGQILLGKRCGSHAPYWSIPGGHVEQGETFEQTAIREVAEECGLHIDAPRFVGVTNNLRTWHDEGV HNVSVIMQVSAPAAAAPQRCEPEKCERWQWCDPHQLPQPCFDACQQGVQLWLTRQTYCATPA >Mature_141_residues TVKVGVGVIIVNAAGQILLGKRCGSHAPYWSIPGGHVEQGETFEQTAIREVAEECGLHIDAPRFVGVTNNLRTWHDEGVH NVSVIMQVSAPAAAAPQRCEPEKCERWQWCDPHQLPQPCFDACQQGVQLWLTRQTYCATPA
Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8922792, Length=103, Percent_Identity=40.7766990291262, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 15631; Mature: 15500
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKVGVGVIIVNAAGQILLGKRCGSHAPYWSIPGGHVEQGETFEQTAIREVAEECGLHI CEEECCCCEEEECCCCCEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE DAPRFVGVTNNLRTWHDEGVHNVSVIMQVSAPAAAAPQRCEPEKCERWQWCDPHQLPQPC CCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCHHH FDACQQGVQLWLTRQTYCATPA HHHHHHHHHEECCCCCEECCCC >Mature Secondary Structure TVKVGVGVIIVNAAGQILLGKRCGSHAPYWSIPGGHVEQGETFEQTAIREVAEECGLHI EEECCCCEEEECCCCCEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE DAPRFVGVTNNLRTWHDEGVHNVSVIMQVSAPAAAAPQRCEPEKCERWQWCDPHQLPQPC CCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCHHH FDACQQGVQLWLTRQTYCATPA HHHHHHHHHEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA