| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yeiQ [H]
Identifier: 238920469
GI number: 238920469
Start: 2473684
End: 2475156
Strand: Direct
Name: yeiQ [H]
Synonym: NT01EI_2580
Alternate gene names: 238920469
Gene position: 2473684-2475156 (Clockwise)
Preceding gene: 238920466
Following gene: 238920475
Centisome position: 64.89
GC content: 61.85
Gene sequence:
>1473_bases ATGAACAACCTCGCCAACTATACTTTAGCGGCCGACGTACAGCGCCCCACCTACGATCGCAGCGCCCTGAAATCCCGCCT CGTGCACCTGGGATTTGGCGCATTTCATCGGGCTCATCAGGCGCTGCTTACCGACCGCGTGCTGAATAAGCTGGGCGGTG ACTGGGGCTACTGTGAGATCAACCTGATCGGCGGTGAGACCCTGATCGAACAGCTGCGCCAGCAGGATCATCTGTACAGC GTACTGGAGAAGGGCGCCAGTCATAATCAGGCCATCGTCATCGGTGCGGTACATGAGTCGCTGCATGCCACCCTCGACGG TATCCACGCCGTGGTAGAAAAGATGGCCGAGCCGCAGGTGGCCATCGTCTCCCTGACGGTCACCGAAAAAGGTTATTGTA TTGAGCCTGGCAGCGGTCGTCTGGATCTCAGCAACCCGCTGATTAAGGCCGATCTGGCGCATCCGCAGCAGCCGGCATCC GCCCCCGGTGCAATTGTAGAGGCCCTGCGCCTGCGCTGCGAACGCGGCCTGCCGCCTTTTACCGTGCTCTCCTGCGACAA CATTCCGGAAAACGGCCACGTGGTGAAAAATGCGGTGCTGGATCTGGCGCAGGCGCGCGATCCGCAGCTGGCGGCGTGGA TCGCCGACAGCGTCACCTTCCCCAGTACCATGGTCGATCGCATCGTACCGGCGGTCACCGAGGAGACCCTGACCCAGATC AGCGCGGCCCTTGGCGTCGATGACCCGTGCGGTATCGCCTGCGAACCCTTTATTCAGTGGGTGGTCGAGGATAACTTCGT CGCCGGACGCCCCGAGTGGGAAGCCGTCGGCGCCGAGCTGGTCAGCGACGTACTGCCCTATGAAGAGATGAAGCTGCGCA TGCTCAACGGCAGCCACTCTTTCCTGGCTTACCTGGGCTATCTGGCTGGCTATCAGCACATTAATGACTGTATGGAAGAT TCCGCCTATCGCCAGAATGCCTATCGCCTGATGCTGCTGGAGCAGGCGCCAACCCTGAGCGTTAGCGGTGTCGATCTGGC ACGCTATGCAGCGCTGCTGATCGAACGCTACAGTAATCCCTCCCTGAAACACCGCACCTGGCAGATAGCCATGGATGGAA CCCAGAAGCTGCCGCAGCGAATGCTGGACTCCATTCGCTGGCATCTGGCCTACGGCAGCACCTTCCCCTGCCTGGCGCTG GGCGTCGCGGGATGGATGCGCTATGTCGGCGGCACCGATGACGCAGGCCTGGCCATCGATGTCCGCGATCCGATGGCAGA AACCCTGAAACAGTGCGTGGCTAACAGCGCTGATGGCGCGGAGCGTGTTCAGGCACTGCTGAGCGTCAGCGCAGTATTCG GCGATGTGCTGCCGCAGGAGCCTCGCTTTGTCGAGGCGGTGAGCGCGGCCTACCTGTCGCTGATGCGCCAGGGCGCGGCC CGTACCTGCGCCGCGCTGGCAAGTCAGGAATAA
Upstream 100 bases:
>100_bases AGCCCTATCAGTAAGTGGTCTAACACCTTTTATGGCTATAGCAACGAAACAGGCCGCTGAAGGCGGCGCTGCTTCCGTCA TCCATCAGATGGAGTTACGA
Downstream 100 bases:
>100_bases TCCTGTCCCAACGCAGTCTGCCGCCCGACGGCGGTAGACTGCGGCGCACCCGACACGGGCGTACCCTTATCTCAAAGCTG CCGTCGTCTCCAGCGGCACA
Product: D-mannonate oxidoreductase
Products: D-fructuronate; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MNNLANYTLAADVQRPTYDRSALKSRLVHLGFGAFHRAHQALLTDRVLNKLGGDWGYCEINLIGGETLIEQLRQQDHLYS VLEKGASHNQAIVIGAVHESLHATLDGIHAVVEKMAEPQVAIVSLTVTEKGYCIEPGSGRLDLSNPLIKADLAHPQQPAS APGAIVEALRLRCERGLPPFTVLSCDNIPENGHVVKNAVLDLAQARDPQLAAWIADSVTFPSTMVDRIVPAVTEETLTQI SAALGVDDPCGIACEPFIQWVVEDNFVAGRPEWEAVGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMED SAYRQNAYRLMLLEQAPTLSVSGVDLARYAALLIERYSNPSLKHRTWQIAMDGTQKLPQRMLDSIRWHLAYGSTFPCLAL GVAGWMRYVGGTDDAGLAIDVRDPMAETLKQCVANSADGAERVQALLSVSAVFGDVLPQEPRFVEAVSAAYLSLMRQGAA RTCAALASQE
Sequences:
>Translated_490_residues MNNLANYTLAADVQRPTYDRSALKSRLVHLGFGAFHRAHQALLTDRVLNKLGGDWGYCEINLIGGETLIEQLRQQDHLYS VLEKGASHNQAIVIGAVHESLHATLDGIHAVVEKMAEPQVAIVSLTVTEKGYCIEPGSGRLDLSNPLIKADLAHPQQPAS APGAIVEALRLRCERGLPPFTVLSCDNIPENGHVVKNAVLDLAQARDPQLAAWIADSVTFPSTMVDRIVPAVTEETLTQI SAALGVDDPCGIACEPFIQWVVEDNFVAGRPEWEAVGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMED SAYRQNAYRLMLLEQAPTLSVSGVDLARYAALLIERYSNPSLKHRTWQIAMDGTQKLPQRMLDSIRWHLAYGSTFPCLAL GVAGWMRYVGGTDDAGLAIDVRDPMAETLKQCVANSADGAERVQALLSVSAVFGDVLPQEPRFVEAVSAAYLSLMRQGAA RTCAALASQE >Mature_490_residues MNNLANYTLAADVQRPTYDRSALKSRLVHLGFGAFHRAHQALLTDRVLNKLGGDWGYCEINLIGGETLIEQLRQQDHLYS VLEKGASHNQAIVIGAVHESLHATLDGIHAVVEKMAEPQVAIVSLTVTEKGYCIEPGSGRLDLSNPLIKADLAHPQQPAS APGAIVEALRLRCERGLPPFTVLSCDNIPENGHVVKNAVLDLAQARDPQLAAWIADSVTFPSTMVDRIVPAVTEETLTQI SAALGVDDPCGIACEPFIQWVVEDNFVAGRPEWEAVGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMED SAYRQNAYRLMLLEQAPTLSVSGVDLARYAALLIERYSNPSLKHRTWQIAMDGTQKLPQRMLDSIRWHLAYGSTFPCLAL GVAGWMRYVGGTDDAGLAIDVRDPMAETLKQCVANSADGAERVQALLSVSAVFGDVLPQEPRFVEAVSAAYLSLMRQGAA RTCAALASQE
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=479, Percent_Identity=64.9269311064718, Blast_Score=659, Evalue=0.0, Organism=Escherichia coli, GI1787823, Length=481, Percent_Identity=62.1621621621622, Blast_Score=622, Evalue=1e-179, Organism=Escherichia coli, GI1790779, Length=477, Percent_Identity=62.0545073375262, Blast_Score=593, Evalue=1e-170, Organism=Escherichia coli, GI1790028, Length=286, Percent_Identity=28.3216783216783, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI48994885, Length=481, Percent_Identity=23.9085239085239, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324401, Length=479, Percent_Identity=39.6659707724426, Blast_Score=358, Evalue=1e-99, Organism=Saccharomyces cerevisiae, GI6320765, Length=479, Percent_Identity=39.6659707724426, Blast_Score=358, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: 1.1.1.57
Molecular weight: Translated: 53384; Mature: 53384
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLANYTLAADVQRPTYDRSALKSRLVHLGFGAFHRAHQALLTDRVLNKLGGDWGYCEI CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE NLIGGETLIEQLRQQDHLYSVLEKGASHNQAIVIGAVHESLHATLDGIHAVVEKMAEPQV EEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCE AIVSLTVTEKGYCIEPGSGRLDLSNPLIKADLAHPQQPASAPGAIVEALRLRCERGLPPF EEEEEEEECCCEEECCCCCCEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCE TVLSCDNIPENGHVVKNAVLDLAQARDPQLAAWIADSVTFPSTMVDRIVPAVTEETLTQI EEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SAALGVDDPCGIACEPFIQWVVEDNFVAGRPEWEAVGAELVSDVLPYEEMKLRMLNGSHS HHHHCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHH FLAYLGYLAGYQHINDCMEDSAYRQNAYRLMLLEQAPTLSVSGVDLARYAALLIERYSNP HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHCCCC SLKHRTWQIAMDGTQKLPQRMLDSIRWHLAYGSTFPCLALGVAGWMRYVGGTDDAGLAID CCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE VRDPMAETLKQCVANSADGAERVQALLSVSAVFGDVLPQEPRFVEAVSAAYLSLMRQGAA CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RTCAALASQE HHHHHHHCCC >Mature Secondary Structure MNNLANYTLAADVQRPTYDRSALKSRLVHLGFGAFHRAHQALLTDRVLNKLGGDWGYCEI CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE NLIGGETLIEQLRQQDHLYSVLEKGASHNQAIVIGAVHESLHATLDGIHAVVEKMAEPQV EEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCE AIVSLTVTEKGYCIEPGSGRLDLSNPLIKADLAHPQQPASAPGAIVEALRLRCERGLPPF EEEEEEEECCCEEECCCCCCEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCE TVLSCDNIPENGHVVKNAVLDLAQARDPQLAAWIADSVTFPSTMVDRIVPAVTEETLTQI EEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SAALGVDDPCGIACEPFIQWVVEDNFVAGRPEWEAVGAELVSDVLPYEEMKLRMLNGSHS HHHHCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHH FLAYLGYLAGYQHINDCMEDSAYRQNAYRLMLLEQAPTLSVSGVDLARYAALLIERYSNP HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHCCCC SLKHRTWQIAMDGTQKLPQRMLDSIRWHLAYGSTFPCLALGVAGWMRYVGGTDDAGLAID CCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE VRDPMAETLKQCVANSADGAERVQALLSVSAVFGDVLPQEPRFVEAVSAAYLSLMRQGAA CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RTCAALASQE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-mannonate; NAD+
Specific reaction: D-mannonate + NAD+ = D-fructuronate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]