| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is torZ [H]
Identifier: 238920462
GI number: 238920462
Start: 2464751
End: 2467243
Strand: Direct
Name: torZ [H]
Synonym: NT01EI_2573
Alternate gene names: 238920462
Gene position: 2464751-2467243 (Clockwise)
Preceding gene: 238920461
Following gene: 238920463
Centisome position: 64.65
GC content: 64.7
Gene sequence:
>2493_bases ATGAGCAAGACAACATCCCTGCCCGCTGCGCCGCTGTGCGTATCCCGCCGCCGCTTTATCGCCGGTGGCGCGGCCCTGCT GGGCGCCCCCCTGCTGACCGGACTGTGGCCGAAATCGGCGCTGGCGCAGGCGATTAGCCAGACGCTGCCCCAGTTTACCG CCCTGCAGCCGGCACAGAAGGGGATCCTGACCGGCGCCCACTGGGGCGCCTTTGAGGCTATCGTCGAATCGGGACGCATG GTCGGCGTGCAGCCGGTCAGCGACGATCCCTGTCCCAACGACCTGATCACCATGGCACCTTACCAGGTGCACGCCGCCAA CCGGATCAAGTATCCCATGGTGCGCAAAAGCTGGCTGGAGGGCGGCGCAGAGCACGGCCGCCCCGAGCTGCGCGGGTGCG ATGAGTGGGTGCGCGTGAGCTGGGATCAGGCCCTGACGCTGGTCAGCGGGCAGATTGCCCGCCTGCAGAAACAGTACGGG CCGCAGTCCATCCACGCCGGCTCCTACGGCTGGAAAAGCGTCGGCATGCTGCATAACAGCCGCACTCTGCTGCAGCGGCT GATGAACCTGAGCGGGGGCTTCCTCGGCTACGCCGGTGACTACTCCACCGGCGCGGCCCAGGTAATCATGACCCATGTGG TCGGCTCCATGGAGGTCTACGAACAGCAGACCGCCTGGCCCAACGTCATCGAGCACAGTGAGCTGATCGTCCTGTGGGGA TGTAACCCCATGATCACCCTTGAGAACAGCTGGAATATCCCGGACCACGTCGGCCAGACCGGCTTTGAGGCGCTGAAGAA AAAAGGCACCCGCATCATCAGCATCGATCCGGTACGCAGCGCCAGTACCACCCAGCTCAACGCGGAATGGATCGCCCCGC ACCCCTATACCGACTCGGCCATGCTGCTCGGTATCGCCCATACCCTGCTGAGCGAAAAGCTGCACGACAGCGACTTCCTC ACCACCTATACCGTGGGATTCGATCGCTTTGCCGACTACCTCAACGGCAAGGATGACGGCGTAGTTAAAGACGCCGCATG GGCGGCCGCCATCAGCGGCGTCGACGCCGATGCCCTGCGCAGCCTGGCGCGGGATATGGCGCACCACCGCACCATGCTCA TGGCCGGCTGGGGCATTCAGCGCCAGCACCACGGTGAACAGCCCCACTGGCTGCTGGTCACCGTGGCGGCCATGCTGGGG CAGATCGGCCTGCCCGGCGGCGGCTTTGGCTTTAGCTACCACTACTCCTCCGGCGGCAGCCCGACCGCGCGCGGCGGCAT TATCTCCGGCATCTCTGCCGGCAATGCCCCGCAAAACAGCCCCACGCCGATCCCGGTGGCACGTATCGCCGACTGCCTGG CCAACCCGGGGAAAACCATCGACTTTAACGGCGGTAAGGTCACCTACCCTGATGTGAAGATGGTCTACGTCGCCGGCGGC AACCCCTTTGGCCACCATCAGAACACCAATAATCTGATCGACGCCTGGCGCCGTCCGGAGACCATCGTGGTCAACGAGCC CTACTGGACCGCCACCGCCAAGTATGCCGATATCGTCCTGCCGGCCACCACCAGCTATGAGCGTAACGATCTGGAGATGG GCGGAGACTATTCGCAGCTGTATGTCTTCCCGATGCACCAGTGCGTTCCCCCGCAGCATGAGGCGCGCAACGACTTCGCC ATCTTCGCCGGTCTGGCCGAAAAGCTGGGGGTGCTGGACGCCTTTAGCGAGGGTAAGGATGAAGCCCGTTGGCTGAAAGG GATGTACGATGGCATGACGGCCCAGGCACGCAACGCGCGCGTCGCGCTGCCGCCGTTCGATATGTTCTGGGCGTCCAATA ACTACATCCGCTTCCCGATCCCCGCCGCCAATAAGAACTGGGTGCGCTACGCCGACTTCCGCGAGAACCCGCTGCTGAAT CCGCTCGGGACCCCCTCCGGCAAGATCGAAATCTACTCCGATACCATCGCCGCCATGCACTACAGCGACTGTCGGGGCCT GCCCAGCTGGCTGCCCCCCCATGAGTGGTATCAGAGCGAGGTCGCCCAGCGCTTCCCGCTCTCCCTGAGCACCGCCCACG CCGTCAACCGCCTGCACTCACAGCTGGACAACACCCCGCTGCGTGAGAAGTATGCGGTCGCCGATCGCGAGGCGATCCTG ATCCACCCACAGGACGCCAAAGCGCGCGGAATTGCCCACGGCGATGTGGTGCGGGCCTGGAACGATCGCGGGCAGATCCT GGTCGGCGCCATCGTCACCGAGGATATTCGTGCCGGCGTCGTGCGGATCAGCGAAGGCGCCTGGTTCGACCCGGCTGATC CGGCGCAGCCCGGTTCACTGTGCAAGAACGGCAATGTGAACTGCCTGACCTTCGACATCGGCTCCTCGAATCTGGCCCAG GGCAACTGCGGCCATATGGCGCAGCTGGAGATCGAGAGGTTCCGCGGCACGCCGCCGCTCAACACTGCGCACGACGTGCC ACGCGGCGCCTAA
Upstream 100 bases:
>100_bases CGCTGAATGAAGAGCAGCTGCGACTGCTGACCCAATATGTCCAGAAACACGCCAGCGATATGTCCGCTAGCGGTGCAGAT CACACCAAGGAGCCCAAGTG
Downstream 100 bases:
>100_bases CCCCTTATGCGGCTGGGGAAACCTGGCCGCTTCTCCTGGCGCAGATAAATATTGAAACCCCTTTTCATTTTAGAGAATTA CCGGTAACATGCGCAGCGCA
Product: molybdopterin guanine dinucleotide-containing S/N-oxide reductase family
Products: NA
Alternate protein names: TMAO reductase; Trimethylamine oxidase [H]
Number of amino acids: Translated: 830; Mature: 829
Protein sequence:
>830_residues MSKTTSLPAAPLCVSRRRFIAGGAALLGAPLLTGLWPKSALAQAISQTLPQFTALQPAQKGILTGAHWGAFEAIVESGRM VGVQPVSDDPCPNDLITMAPYQVHAANRIKYPMVRKSWLEGGAEHGRPELRGCDEWVRVSWDQALTLVSGQIARLQKQYG PQSIHAGSYGWKSVGMLHNSRTLLQRLMNLSGGFLGYAGDYSTGAAQVIMTHVVGSMEVYEQQTAWPNVIEHSELIVLWG CNPMITLENSWNIPDHVGQTGFEALKKKGTRIISIDPVRSASTTQLNAEWIAPHPYTDSAMLLGIAHTLLSEKLHDSDFL TTYTVGFDRFADYLNGKDDGVVKDAAWAAAISGVDADALRSLARDMAHHRTMLMAGWGIQRQHHGEQPHWLLVTVAAMLG QIGLPGGGFGFSYHYSSGGSPTARGGIISGISAGNAPQNSPTPIPVARIADCLANPGKTIDFNGGKVTYPDVKMVYVAGG NPFGHHQNTNNLIDAWRRPETIVVNEPYWTATAKYADIVLPATTSYERNDLEMGGDYSQLYVFPMHQCVPPQHEARNDFA IFAGLAEKLGVLDAFSEGKDEARWLKGMYDGMTAQARNARVALPPFDMFWASNNYIRFPIPAANKNWVRYADFRENPLLN PLGTPSGKIEIYSDTIAAMHYSDCRGLPSWLPPHEWYQSEVAQRFPLSLSTAHAVNRLHSQLDNTPLREKYAVADREAIL IHPQDAKARGIAHGDVVRAWNDRGQILVGAIVTEDIRAGVVRISEGAWFDPADPAQPGSLCKNGNVNCLTFDIGSSNLAQ GNCGHMAQLEIERFRGTPPLNTAHDVPRGA
Sequences:
>Translated_830_residues MSKTTSLPAAPLCVSRRRFIAGGAALLGAPLLTGLWPKSALAQAISQTLPQFTALQPAQKGILTGAHWGAFEAIVESGRM VGVQPVSDDPCPNDLITMAPYQVHAANRIKYPMVRKSWLEGGAEHGRPELRGCDEWVRVSWDQALTLVSGQIARLQKQYG PQSIHAGSYGWKSVGMLHNSRTLLQRLMNLSGGFLGYAGDYSTGAAQVIMTHVVGSMEVYEQQTAWPNVIEHSELIVLWG CNPMITLENSWNIPDHVGQTGFEALKKKGTRIISIDPVRSASTTQLNAEWIAPHPYTDSAMLLGIAHTLLSEKLHDSDFL TTYTVGFDRFADYLNGKDDGVVKDAAWAAAISGVDADALRSLARDMAHHRTMLMAGWGIQRQHHGEQPHWLLVTVAAMLG QIGLPGGGFGFSYHYSSGGSPTARGGIISGISAGNAPQNSPTPIPVARIADCLANPGKTIDFNGGKVTYPDVKMVYVAGG NPFGHHQNTNNLIDAWRRPETIVVNEPYWTATAKYADIVLPATTSYERNDLEMGGDYSQLYVFPMHQCVPPQHEARNDFA IFAGLAEKLGVLDAFSEGKDEARWLKGMYDGMTAQARNARVALPPFDMFWASNNYIRFPIPAANKNWVRYADFRENPLLN PLGTPSGKIEIYSDTIAAMHYSDCRGLPSWLPPHEWYQSEVAQRFPLSLSTAHAVNRLHSQLDNTPLREKYAVADREAIL IHPQDAKARGIAHGDVVRAWNDRGQILVGAIVTEDIRAGVVRISEGAWFDPADPAQPGSLCKNGNVNCLTFDIGSSNLAQ GNCGHMAQLEIERFRGTPPLNTAHDVPRGA >Mature_829_residues SKTTSLPAAPLCVSRRRFIAGGAALLGAPLLTGLWPKSALAQAISQTLPQFTALQPAQKGILTGAHWGAFEAIVESGRMV GVQPVSDDPCPNDLITMAPYQVHAANRIKYPMVRKSWLEGGAEHGRPELRGCDEWVRVSWDQALTLVSGQIARLQKQYGP QSIHAGSYGWKSVGMLHNSRTLLQRLMNLSGGFLGYAGDYSTGAAQVIMTHVVGSMEVYEQQTAWPNVIEHSELIVLWGC NPMITLENSWNIPDHVGQTGFEALKKKGTRIISIDPVRSASTTQLNAEWIAPHPYTDSAMLLGIAHTLLSEKLHDSDFLT TYTVGFDRFADYLNGKDDGVVKDAAWAAAISGVDADALRSLARDMAHHRTMLMAGWGIQRQHHGEQPHWLLVTVAAMLGQ IGLPGGGFGFSYHYSSGGSPTARGGIISGISAGNAPQNSPTPIPVARIADCLANPGKTIDFNGGKVTYPDVKMVYVAGGN PFGHHQNTNNLIDAWRRPETIVVNEPYWTATAKYADIVLPATTSYERNDLEMGGDYSQLYVFPMHQCVPPQHEARNDFAI FAGLAEKLGVLDAFSEGKDEARWLKGMYDGMTAQARNARVALPPFDMFWASNNYIRFPIPAANKNWVRYADFRENPLLNP LGTPSGKIEIYSDTIAAMHYSDCRGLPSWLPPHEWYQSEVAQRFPLSLSTAHAVNRLHSQLDNTPLREKYAVADREAILI HPQDAKARGIAHGDVVRAWNDRGQILVGAIVTEDIRAGVVRISEGAWFDPADPAQPGSLCKNGNVNCLTFDIGSSNLAQG NCGHMAQLEIERFRGTPPLNTAHDVPRGA
Specific function: Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=829, Percent_Identity=51.5078407720145, Blast_Score=810, Evalue=0.0, Organism=Escherichia coli, GI145693196, Length=773, Percent_Identity=49.1591203104787, Blast_Score=731, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=831, Percent_Identity=45.9687123947052, Blast_Score=699, Evalue=0.0, Organism=Escherichia coli, GI87081797, Length=751, Percent_Identity=31.8242343541944, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI1787870, Length=750, Percent_Identity=29.4666666666667, Blast_Score=263, Evalue=3e-71, Organism=Escherichia coli, GI171474008, Length=746, Percent_Identity=28.5522788203753, Blast_Score=258, Evalue=7e-70, Organism=Escherichia coli, GI3868721, Length=678, Percent_Identity=21.2389380530973, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 90586; Mature: 90454
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTTSLPAAPLCVSRRRFIAGGAALLGAPLLTGLWPKSALAQAISQTLPQFTALQPAQK CCCCCCCCCCCHHHHCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH GILTGAHWGAFEAIVESGRMVGVQPVSDDPCPNDLITMAPYQVHAANRIKYPMVRKSWLE CCEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCEEEECCCCCCCHHHHHHHHC GGAEHGRPELRGCDEWVRVSWDQALTLVSGQIARLQKQYGPQSIHAGSYGWKSVGMLHNS CCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC RTLLQRLMNLSGGFLGYAGDYSTGAAQVIMTHVVGSMEVYEQQTAWPNVIEHSELIVLWG HHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC CNPMITLENSWNIPDHVGQTGFEALKKKGTRIISIDPVRSASTTQLNAEWIAPHPYTDSA CCEEEEECCCCCCCHHHCHHHHHHHHHCCCEEEEECCCCCCCCCEECCEEECCCCCCCCH MLLGIAHTLLSEKLHDSDFLTTYTVGFDRFADYLNGKDDGVVKDAAWAAAISGVDADALR HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHH SLARDMAHHRTMLMAGWGIQRQHHGEQPHWLLVTVAAMLGQIGLPGGGFGFSYHYSSGGS HHHHHHHHHHEEEEECCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC PTARGGIISGISAGNAPQNSPTPIPVARIADCLANPGKTIDFNGGKVTYPDVKMVYVAGG CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCEEECCCEEEEEEECC NPFGHHQNTNNLIDAWRRPETIVVNEPYWTATAKYADIVLPATTSYERNDLEMGGDYSQL CCCCCCCCCCHHHHHHCCCCEEEEECCCEEEECCEEEEEEECCCCCCCCCCCCCCCEEEE YVFPMHQCVPPQHEARNDFAIFAGLAEKLGVLDAFSEGKDEARWLKGMYDGMTAQARNAR EEEEHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCE VALPPFDMFWASNNYIRFPIPAANKNWVRYADFRENPLLNPLGTPSGKIEIYSDTIAAMH EECCCHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHC YSDCRGLPSWLPPHEWYQSEVAQRFPLSLSTAHAVNRLHSQLDNTPLREKYAVADREAIL CHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEE IHPQDAKARGIAHGDVVRAWNDRGQILVGAIVTEDIRAGVVRISEGAWFDPADPAQPGSL EECCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCEEEECCCCCCCCCCCCCCCCC CKNGNVNCLTFDIGSSNLAQGNCGHMAQLEIERFRGTPPLNTAHDVPRGA CCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SKTTSLPAAPLCVSRRRFIAGGAALLGAPLLTGLWPKSALAQAISQTLPQFTALQPAQK CCCCCCCCCCHHHHCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH GILTGAHWGAFEAIVESGRMVGVQPVSDDPCPNDLITMAPYQVHAANRIKYPMVRKSWLE CCEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCEEEECCCCCCCHHHHHHHHC GGAEHGRPELRGCDEWVRVSWDQALTLVSGQIARLQKQYGPQSIHAGSYGWKSVGMLHNS CCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC RTLLQRLMNLSGGFLGYAGDYSTGAAQVIMTHVVGSMEVYEQQTAWPNVIEHSELIVLWG HHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC CNPMITLENSWNIPDHVGQTGFEALKKKGTRIISIDPVRSASTTQLNAEWIAPHPYTDSA CCEEEEECCCCCCCHHHCHHHHHHHHHCCCEEEEECCCCCCCCCEECCEEECCCCCCCCH MLLGIAHTLLSEKLHDSDFLTTYTVGFDRFADYLNGKDDGVVKDAAWAAAISGVDADALR HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHH SLARDMAHHRTMLMAGWGIQRQHHGEQPHWLLVTVAAMLGQIGLPGGGFGFSYHYSSGGS HHHHHHHHHHEEEEECCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC PTARGGIISGISAGNAPQNSPTPIPVARIADCLANPGKTIDFNGGKVTYPDVKMVYVAGG CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCEEECCCEEEEEEECC NPFGHHQNTNNLIDAWRRPETIVVNEPYWTATAKYADIVLPATTSYERNDLEMGGDYSQL CCCCCCCCCCHHHHHHCCCCEEEEECCCEEEECCEEEEEEECCCCCCCCCCCCCCCEEEE YVFPMHQCVPPQHEARNDFAIFAGLAEKLGVLDAFSEGKDEARWLKGMYDGMTAQARNAR EEEEHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCE VALPPFDMFWASNNYIRFPIPAANKNWVRYADFRENPLLNPLGTPSGKIEIYSDTIAAMH EECCCHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHC YSDCRGLPSWLPPHEWYQSEVAQRFPLSLSTAHAVNRLHSQLDNTPLREKYAVADREAIL CHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEE IHPQDAKARGIAHGDVVRAWNDRGQILVGAIVTEDIRAGVVRISEGAWFDPADPAQPGSL EECCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCEEEECCCCCCCCCCCCCCCCC CKNGNVNCLTFDIGSSNLAQGNCGHMAQLEIERFRGTPPLNTAHDVPRGA CCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]