| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is nfsA [H]
Identifier: 238920417
GI number: 238920417
Start: 2427583
End: 2428305
Strand: Reverse
Name: nfsA [H]
Synonym: NT01EI_2527
Alternate gene names: 238920417
Gene position: 2428305-2427583 (Counterclockwise)
Preceding gene: 238920419
Following gene: 238920416
Centisome position: 63.7
GC content: 61.13
Gene sequence:
>723_bases ATGATGTCGACCATCGATCTACTGCGTGATCACCGTTCTATCCGCCAGTTTAGCGCCGAAGAGATCGGCGAAGCACAGCG GCTGGCTATTCTGGAGGCGGCGCGTGCAACGTCATCGTCCAGCTTTCTGCAGTGTACGTCGATTATCCGGATCACCGAGC GCGCGCTACGTGAGCAGCTGGTCGAGCTGGCCGGTGGGCAGCAGTACGTGCTGGACGCCGCCGAGTTCTGGGTGTTCTGC GCAGACTTTCAGCGTCACCATCAGATCTTTCCGCAGGCGGATCTGGGGTCGGCTGAACAGCTGCTGCTGGGCTGCGTTGA CACGGCGCTGATGGCGCAAAATGCGCTGACGGCAGCCGAGTCGCTGGGGCTTGGCGGGGTATTCATTGGCGGCATACGCA ATAATATTGAGCAGGTGACGGCGCTGCTGGGCTGCCCGCAGCATGTCCTGCCGCTAATGGGTCTGTGCTTGGGGCATCCG GCGCAGCATCCGCAGCAAAAGCCGCGTCTGCCGCTGAGTATTCTGGTGCATGAGAATGGCTATCAGCTGCTGGATCGCGC CGCGCTGGCGCAATACGACGCCCACGTTACTGCCTACTATGCCCAGCGTAGCGATAACGTCCGCCAAGAGAGCTGGAGCG AACAGATGAGCCGTACCCTGGAGAAGGAGCAGCGTCCCTTTATGCTGGCCTACCTGCGGCGTCAGGGTTGGATCACCCAC TGA
Upstream 100 bases:
>100_bases AGCATTAAGGGGTAGACTGACTACCAGATTACGCCGTACCGTCAGCCATTGGTGCGGCCATTTCCGTCTCAAACGACTTA CCGGGGAGCACTGTTTCGTT
Downstream 100 bases:
>100_bases GCGCCGGCGCGCAGTGCTCAGTGGGCGCTGAACTGGTTGCTGTCGCGGTAGTAGCGGAAGCCGGCGGCGCCGAGGCGCGA TTCCAGCAGGGGCTGTGGTA
Product: oxygen-insensitive NADPH nitroreductase
Products: NA
Alternate protein names: Modulator of drug activity A [H]
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MMSTIDLLRDHRSIRQFSAEEIGEAQRLAILEAARATSSSSFLQCTSIIRITERALREQLVELAGGQQYVLDAAEFWVFC ADFQRHHQIFPQADLGSAEQLLLGCVDTALMAQNALTAAESLGLGGVFIGGIRNNIEQVTALLGCPQHVLPLMGLCLGHP AQHPQQKPRLPLSILVHENGYQLLDRAALAQYDAHVTAYYAQRSDNVRQESWSEQMSRTLEKEQRPFMLAYLRRQGWITH
Sequences:
>Translated_240_residues MMSTIDLLRDHRSIRQFSAEEIGEAQRLAILEAARATSSSSFLQCTSIIRITERALREQLVELAGGQQYVLDAAEFWVFC ADFQRHHQIFPQADLGSAEQLLLGCVDTALMAQNALTAAESLGLGGVFIGGIRNNIEQVTALLGCPQHVLPLMGLCLGHP AQHPQQKPRLPLSILVHENGYQLLDRAALAQYDAHVTAYYAQRSDNVRQESWSEQMSRTLEKEQRPFMLAYLRRQGWITH >Mature_240_residues MMSTIDLLRDHRSIRQFSAEEIGEAQRLAILEAARATSSSSFLQCTSIIRITERALREQLVELAGGQQYVLDAAEFWVFC ADFQRHHQIFPQADLGSAEQLLLGCVDTALMAQNALTAAESLGLGGVFIGGIRNNIEQVTALLGCPQHVLPLMGLCLGHP AQHPQQKPRLPLSILVHENGYQLLDRAALAQYDAHVTAYYAQRSDNVRQESWSEQMSRTLEKEQRPFMLAYLRRQGWITH
Specific function: Reduction of nitroaromatic compounds using NADH. Reduces nitrofurazone by a ping-pong bi-bi mechanism possibly to generate a two-electron transfer product. Major component of the oxygen- insensitive nitroreductase activity in E.coli [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin oxidoreductase frp family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=239, Percent_Identity=68.2008368200837, Blast_Score=313, Evalue=4e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016446 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26910; Mature: 26910
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSTIDLLRDHRSIRQFSAEEIGEAQRLAILEAARATSSSSFLQCTSIIRITERALREQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VELAGGQQYVLDAAEFWVFCADFQRHHQIFPQADLGSAEQLLLGCVDTALMAQNALTAAE HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLGLGGVFIGGIRNNIEQVTALLGCPQHVLPLMGLCLGHPAQHPQQKPRLPLSILVHENG HCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC YQLLDRAALAQYDAHVTAYYAQRSDNVRQESWSEQMSRTLEKEQRPFMLAYLRRQGWITH HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MMSTIDLLRDHRSIRQFSAEEIGEAQRLAILEAARATSSSSFLQCTSIIRITERALREQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VELAGGQQYVLDAAEFWVFCADFQRHHQIFPQADLGSAEQLLLGCVDTALMAQNALTAAE HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLGLGGVFIGGIRNNIEQVTALLGCPQHVLPLMGLCLGHPAQHPQQKPRLPLSILVHENG HCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC YQLLDRAALAQYDAHVTAYYAQRSDNVRQESWSEQMSRTLEKEQRPFMLAYLRRQGWITH HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7568050; 8755878; 8905232; 9278503; 2570347; 9440535; 11034992 [H]