| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is artM [H]
Identifier: 238920411
GI number: 238920411
Start: 2422742
End: 2423413
Strand: Direct
Name: artM [H]
Synonym: NT01EI_2521
Alternate gene names: 238920411
Gene position: 2422742-2423413 (Clockwise)
Preceding gene: 238920410
Following gene: 238920412
Centisome position: 63.55
GC content: 61.01
Gene sequence:
>672_bases ATGATGTTGAGCTATATTCCGGATCTGCTGCAGGGGCTGCATACCAGCCTGTCGCTCACCGTGGTCTCCCTGCTGGTCGC CCTGGCGCTGGCGCTGTGCTTTACCGTGATCCTGACCCTGCGGCCGCTGATCCTGACGCCGCTGGTGCAGGGTTACATCA CTCTGTTTACCGGCACTCCGCTGCTGGTGCAGATTTTCCTGATCTACTACGGCCCCGGGCAGTTTGCCTGGATCCGTGAT ACACCCTGGCTGTGGAGTGCCCTATCTCAGCCCTGGCTGTGCGCCATGCTGGCGCTGGCGCTCAACAGCGCCGCCTACAG CACCCAGCTGTTTTATGGCGCGATGCGCGCCATTCCCAACGGCCAGTGGCAATCCTGCGCGGCGCTGGGCATGTCCAAGG CCCAAACCCTGCGGATTCTGCTGCCCTATGCCTTTAAGCGCGCGCTCTCCTCTTACTCCAACGAGGTGGTGCTGATCTTT AAGAGCACGTCGCTGGCCTACACCATCACCCTGATGGAGGTGATGGGCTATGCCCAGCAGCTGTATGGGCGCACCTACGA CGTGATGGTATTCGGCGCCGCCGGCCTGGTCTACCTGTGCGTCAACGGCCTATTGACGCTGATGATGCGCATGATTGAGC GCCGGGCGCTGGCATTTGAGCAACGTAGTTAA
Upstream 100 bases:
>100_bases ACTGCATCGCGGCGGCGATCTACCTGGTGATCACCCTGTTCAGCCAATACGTTCTCAAGCGTATTGAGCTGCGTACCACC CGCTTTGAACGGAGTGCCGC
Downstream 100 bases:
>100_bases ACGGTTCAATGTCTTGAAAGGTCGGTTATCCACGGCCTTTTTTTACACCTGACAAGAAATACAGAAAATATATTTACCCA CTTCTATTGCATAATAATGC
Product: arginine transporter permease subunit ArtM
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MMLSYIPDLLQGLHTSLSLTVVSLLVALALALCFTVILTLRPLILTPLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRD TPWLWSALSQPWLCAMLALALNSAAYSTQLFYGAMRAIPNGQWQSCAALGMSKAQTLRILLPYAFKRALSSYSNEVVLIF KSTSLAYTITLMEVMGYAQQLYGRTYDVMVFGAAGLVYLCVNGLLTLMMRMIERRALAFEQRS
Sequences:
>Translated_223_residues MMLSYIPDLLQGLHTSLSLTVVSLLVALALALCFTVILTLRPLILTPLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRD TPWLWSALSQPWLCAMLALALNSAAYSTQLFYGAMRAIPNGQWQSCAALGMSKAQTLRILLPYAFKRALSSYSNEVVLIF KSTSLAYTITLMEVMGYAQQLYGRTYDVMVFGAAGLVYLCVNGLLTLMMRMIERRALAFEQRS >Mature_223_residues MMLSYIPDLLQGLHTSLSLTVVSLLVALALALCFTVILTLRPLILTPLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRD TPWLWSALSQPWLCAMLALALNSAAYSTQLFYGAMRAIPNGQWQSCAALGMSKAQTLRILLPYAFKRALSSYSNEVVLIF KSTSLAYTITLMEVMGYAQQLYGRTYDVMVFGAAGLVYLCVNGLLTLMMRMIERRALAFEQRS
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=77.4774774774775, Blast_Score=354, Evalue=3e-99, Organism=Escherichia coli, GI1788645, Length=163, Percent_Identity=36.8098159509202, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=33.4862385321101, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=28.6995515695067, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=27.6995305164319, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=25.8064516129032, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=28.1818181818182, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=26.027397260274, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24851; Mature: 24851
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLSYIPDLLQGLHTSLSLTVVSLLVALALALCFTVILTLRPLILTPLVQGYITLFTGTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LLVQIFLIYYGPGQFAWIRDTPWLWSALSQPWLCAMLALALNSAAYSTQLFYGAMRAIPN HHHHHHHHHCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GQWQSCAALGMSKAQTLRILLPYAFKRALSSYSNEVVLIFKSTSLAYTITLMEVMGYAQQ CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH LYGRTYDVMVFGAAGLVYLCVNGLLTLMMRMIERRALAFEQRS HHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMLSYIPDLLQGLHTSLSLTVVSLLVALALALCFTVILTLRPLILTPLVQGYITLFTGTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LLVQIFLIYYGPGQFAWIRDTPWLWSALSQPWLCAMLALALNSAAYSTQLFYGAMRAIPN HHHHHHHHHCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GQWQSCAALGMSKAQTLRILLPYAFKRALSSYSNEVVLIFKSTSLAYTITLMEVMGYAQQ CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH LYGRTYDVMVFGAAGLVYLCVNGLLTLMMRMIERRALAFEQRS HHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]