| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yehA [H]
Identifier: 238920407
GI number: 238920407
Start: 2419194
End: 2420237
Strand: Direct
Name: yehA [H]
Synonym: NT01EI_2517
Alternate gene names: 238920407
Gene position: 2419194-2420237 (Clockwise)
Preceding gene: 238920406
Following gene: 238920408
Centisome position: 63.46
GC content: 59.1
Gene sequence:
>1044_bases ATGAAATATCACCGTTATTTTTTTACCGCGCTGTTACTGCTCAGCGGCCCTGCGTTCTCCTGGTGCAAGTTGGATAGCCC GGGCATAGAGAGCCAGCGAGGGCAGGTGCTGATGAGTAACCAGAATATGTTTCCCGGCGGGCAGCAGATGTCGGTGCCGC TGCCGTTATTCAGCAAGCAAACCCTATGCTCCGCCTATAGCAGTGAGCAAAACGAGGTACATCTCGGCACGCCCTACGAG CGGGGTGTCGTGGTCAAGTTCTATGACAATGTCTTTATCGATATCGCCATCCAGGCACCGCCCCTGGCGACCATCAAGCT ACAGAAGGGCAACTATACGGCGGCACAGTTTCTCGATCGGCTCACCGTCACCGCCAGGCCGGTCGCCCCCACCCAGACCA AGCGGGTAGCCATAGACGGAGAGTATCTGTTGGAATCCGCGATGGTGATCAGCGCCGGCAGCGGTACCTCCGGCTCTCTG GGGGAGTTTCTCCGGCGCTTTATCACGTTTCTCTTTACCGGGAAATGGCCCGCATCGGAAAACGATCTGTACCAGGTGCA CCTTAATCTGACGCTGGATTACAAAGCGACCACCTGCCAGTTTACTGACACCCTGATCAGGCTGCCGCCCCTCTCCATCA GTGACCTGACGCAAGGCGGTGCTGTCACCAGCGCGATTGCCAACCACTCACTGGTCGCACAATGCGACTCGCTCAGCGGT GATGACAGCAGAGCTCAGACCAACCGCACCCTACGGGTGACCCTGAGCAGCGACGCGCTGCTGCCGGAGAATCCCCGCGT CGTACTGCCACACTCGGGGACTGGCGGCGTCGGCTTTATACTGTACAACGAGCAGCAGCAGCCTATCACGCTGGGCGGCG CGGCGGCTCAGCCCAGCGTCATCCGGCTGATCCCCCAGTGGACGACGCTGCCCGAGCGTGGATTCAATATCCCCATCCAC GCCGGTTACTATGTCTATAACCGCAGCCTGGCGCAGCCCGGCCCGCTGGAAGCCAACGTTACCATCAACATTGACTATGA CTAA
Upstream 100 bases:
>100_bases GCTGGATCCGCAGGCGGATACCCGCTGCACCATTACCCTCTCAGCTGCCACGCTGAGCAGCCAAACCCACCTTTGCCGCT GAGTCTAATGAGGTTGCATC
Downstream 100 bases:
>100_bases ACGATAGTCGGGCGGCCTCAGACCGCCCGCGCCGCCTTAGCACACCCTTTTTCCCTGCGCCATCCGACGAACCATAACCC GATATCGTACTCTTTCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKYHRYFFTALLLLSGPAFSWCKLDSPGIESQRGQVLMSNQNMFPGGQQMSVPLPLFSKQTLCSAYSSEQNEVHLGTPYE RGVVVKFYDNVFIDIAIQAPPLATIKLQKGNYTAAQFLDRLTVTARPVAPTQTKRVAIDGEYLLESAMVISAGSGTSGSL GEFLRRFITFLFTGKWPASENDLYQVHLNLTLDYKATTCQFTDTLIRLPPLSISDLTQGGAVTSAIANHSLVAQCDSLSG DDSRAQTNRTLRVTLSSDALLPENPRVVLPHSGTGGVGFILYNEQQQPITLGGAAAQPSVIRLIPQWTTLPERGFNIPIH AGYYVYNRSLAQPGPLEANVTINIDYD
Sequences:
>Translated_347_residues MKYHRYFFTALLLLSGPAFSWCKLDSPGIESQRGQVLMSNQNMFPGGQQMSVPLPLFSKQTLCSAYSSEQNEVHLGTPYE RGVVVKFYDNVFIDIAIQAPPLATIKLQKGNYTAAQFLDRLTVTARPVAPTQTKRVAIDGEYLLESAMVISAGSGTSGSL GEFLRRFITFLFTGKWPASENDLYQVHLNLTLDYKATTCQFTDTLIRLPPLSISDLTQGGAVTSAIANHSLVAQCDSLSG DDSRAQTNRTLRVTLSSDALLPENPRVVLPHSGTGGVGFILYNEQQQPITLGGAAAQPSVIRLIPQWTTLPERGFNIPIH AGYYVYNRSLAQPGPLEANVTINIDYD >Mature_347_residues MKYHRYFFTALLLLSGPAFSWCKLDSPGIESQRGQVLMSNQNMFPGGQQMSVPLPLFSKQTLCSAYSSEQNEVHLGTPYE RGVVVKFYDNVFIDIAIQAPPLATIKLQKGNYTAAQFLDRLTVTARPVAPTQTKRVAIDGEYLLESAMVISAGSGTSGSL GEFLRRFITFLFTGKWPASENDLYQVHLNLTLDYKATTCQFTDTLIRLPPLSISDLTQGGAVTSAIANHSLVAQCDSLSG DDSRAQTNRTLRVTLSSDALLPENPRVVLPHSGTGGVGFILYNEQQQPITLGGAAAQPSVIRLIPQWTTLPERGFNIPIH AGYYVYNRSLAQPGPLEANVTINIDYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788426, Length=197, Percent_Identity=31.9796954314721, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008966 - InterPro: IPR000259 - InterPro: IPR016959 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37982; Mature: 37982
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYHRYFFTALLLLSGPAFSWCKLDSPGIESQRGQVLMSNQNMFPGGQQMSVPLPLFSKQ CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCH TLCSAYSSEQNEVHLGTPYERGVVVKFYDNVFIDIAIQAPPLATIKLQKGNYTAAQFLDR HHHHHHCCCCCEEEECCCCCCCEEEEEECCEEEEEEEECCCEEEEEEECCCCHHHHHHHH LTVTARPVAPTQTKRVAIDGEYLLESAMVISAGSGTSGSLGEFLRRFITFLFTGKWPASE HEEEECCCCCCCCEEEEECHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCCC NDLYQVHLNLTLDYKATTCQFTDTLIRLPPLSISDLTQGGAVTSAIANHSLVAQCDSLSG CCEEEEEEEEEEECCEEEEEECCCEEECCCCCHHHCCCCCCHHHHHHCCEEEEEECCCCC DDSRAQTNRTLRVTLSSDALLPENPRVVLPHSGTGGVGFILYNEQQQPITLGGAAAQPSV CCCHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCE IRLIPQWTTLPERGFNIPIHAGYYVYNRSLAQPGPLEANVTINIDYD EEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKYHRYFFTALLLLSGPAFSWCKLDSPGIESQRGQVLMSNQNMFPGGQQMSVPLPLFSKQ CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCH TLCSAYSSEQNEVHLGTPYERGVVVKFYDNVFIDIAIQAPPLATIKLQKGNYTAAQFLDR HHHHHHCCCCCEEEECCCCCCCEEEEEECCEEEEEEEECCCEEEEEEECCCCHHHHHHHH LTVTARPVAPTQTKRVAIDGEYLLESAMVISAGSGTSGSLGEFLRRFITFLFTGKWPASE HEEEECCCCCCCCEEEEECHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCCC NDLYQVHLNLTLDYKATTCQFTDTLIRLPPLSISDLTQGGAVTSAIANHSLVAQCDSLSG CCEEEEEEEEEEECCEEEEEECCCEEECCCCCHHHCCCCCCHHHHHHCCEEEEEECCCCC DDSRAQTNRTLRVTLSSDALLPENPRVVLPHSGTGGVGFILYNEQQQPITLGGAAAQPSV CCCHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCE IRLIPQWTTLPERGFNIPIHAGYYVYNRSLAQPGPLEANVTINIDYD EEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]