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The map label for this gene is yehC [H]

Identifier: 238920405

GI number: 238920405

Start: 2416009

End: 2416701

Strand: Direct

Name: yehC [H]

Synonym: NT01EI_2515

Alternate gene names: 238920405

Gene position: 2416009-2416701 (Clockwise)

Preceding gene: 238920404

Following gene: 238920406

Centisome position: 63.37

GC content: 59.16

Gene sequence:

>693_bases
ATGAAAAAAACTCTGCTCGCCCTGCTGTGCGCCATCGCTGCCTGGCCAGCTTGCGCCACCATCGTCATTTACGGCACCCG
GGTTATCTACCCGGCCCAGCGCCAGGAGATTACCGTTCAGCTGGCTAACCGCGGTGACAAGCGCTCCCTGATCCAGGCCT
GGATCGATGACGGAGATCCCAACGTCCCCCCTGAAGAGGTTAAGGCTCCCTTCCTGCTGACACCACCGATCGCGACCGTC
ACAGCCGGTAACGGTCAGCAGCTGCGGATTAGGGTGCTGCCCAACACCCTGCCGCAGGATCGTGAATCGCTGTTTTACCT
CAACGTGATCGACATTCCGCCGGATAACCCGGCGCGCAGTGGTAACCTGCTTAAACTGGCGATGCAAAACCGCATCAAAC
TGTTCTACCGTCCCCAAGGGATCGCAGCGCTCGACGAAAAAACCGTCGGCCAGCTCTCCGCCCGCCGCGATGTGCAGGGT
GTGACGCTGAATAACCGTTCGCCTAACCACATCACGATTACCGCGATCGGCACCGGTGAACGGGAGCAACTGCTAAAGGC
AACCCTGATGCTGGCCCCCTTTTCCCAACGGCACATCGCCGTCTCCGCTCTGCCGGGCAGTATCTCCACGCTGAGCCTCT
CCTATCTGAATGACTATGGCGTTAAACGCCAGCAGGCCATTCCCCTTAATTAA

Upstream 100 bases:

>100_bases
CCAAGGGCACAGTGAGCTCTGCCGTCACCTACACCATTACCCACGATTAACCTTAACCAGCGGGACTCCGCAGGGAGTCC
CGGTTCCCAGTGGTGACCCC

Downstream 100 bases:

>100_bases
TCGCAGCGAGTGAGAAACGGATGCTCAGGTTAAACGCCATTACCCTCTCCCTGGCCCTGCAGCCTCCCGCTGCCTGCGCC
ATGGCCAGCGCGACAGATAC

Product: chaperone protein FimC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKKTLLALLCAIAAWPACATIVIYGTRVIYPAQRQEITVQLANRGDKRSLIQAWIDDGDPNVPPEEVKAPFLLTPPIATV
TAGNGQQLRIRVLPNTLPQDRESLFYLNVIDIPPDNPARSGNLLKLAMQNRIKLFYRPQGIAALDEKTVGQLSARRDVQG
VTLNNRSPNHITITAIGTGEREQLLKATLMLAPFSQRHIAVSALPGSISTLSLSYLNDYGVKRQQAIPLN

Sequences:

>Translated_230_residues
MKKTLLALLCAIAAWPACATIVIYGTRVIYPAQRQEITVQLANRGDKRSLIQAWIDDGDPNVPPEEVKAPFLLTPPIATV
TAGNGQQLRIRVLPNTLPQDRESLFYLNVIDIPPDNPARSGNLLKLAMQNRIKLFYRPQGIAALDEKTVGQLSARRDVQG
VTLNNRSPNHITITAIGTGEREQLLKATLMLAPFSQRHIAVSALPGSISTLSLSYLNDYGVKRQQAIPLN
>Mature_230_residues
MKKTLLALLCAIAAWPACATIVIYGTRVIYPAQRQEITVQLANRGDKRSLIQAWIDDGDPNVPPEEVKAPFLLTPPIATV
TAGNGQQLRIRVLPNTLPQDRESLFYLNVIDIPPDNPARSGNLLKLAMQNRIKLFYRPQGIAALDEKTVGQLSARRDVQG
VTLNNRSPNHITITAIGTGEREQLLKATLMLAPFSQRHIAVSALPGSISTLSLSYLNDYGVKRQQAIPLN

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1788428, Length=219, Percent_Identity=46.5753424657534, Blast_Score=214, Evalue=4e-57,
Organism=Escherichia coli, GI1786333, Length=229, Percent_Identity=32.7510917030568, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1790771, Length=220, Percent_Identity=33.6363636363636, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1789532, Length=220, Percent_Identity=30.9090909090909, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1787171, Length=222, Percent_Identity=31.0810810810811, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082203, Length=226, Percent_Identity=31.4159292035398, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1788677, Length=202, Percent_Identity=29.7029702970297, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786936, Length=205, Percent_Identity=32.6829268292683, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786743, Length=219, Percent_Identity=29.6803652968037, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI87081806, Length=232, Percent_Identity=30.1724137931034, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 25265; Mature: 25265

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLALLCAIAAWPACATIVIYGTRVIYPAQRQEITVQLANRGDKRSLIQAWIDDGDP
CCHHHHHHHHHHHHCHHHEEEEEECCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCC
NVPPEEVKAPFLLTPPIATVTAGNGQQLRIRVLPNTLPQDRESLFYLNVIDIPPDNPARS
CCCHHHHCCCEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCC
GNLLKLAMQNRIKLFYRPQGIAALDEKTVGQLSARRDVQGVTLNNRSPNHITITAIGTGE
CCEEEEEECCCEEEEECCCCCEECCHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCC
REQLLKATLMLAPFSQRHIAVSALPGSISTLSLSYLNDYGVKRQQAIPLN
HHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTLLALLCAIAAWPACATIVIYGTRVIYPAQRQEITVQLANRGDKRSLIQAWIDDGDP
CCHHHHHHHHHHHHCHHHEEEEEECCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCC
NVPPEEVKAPFLLTPPIATVTAGNGQQLRIRVLPNTLPQDRESLFYLNVIDIPPDNPARS
CCCHHHHCCCEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCC
GNLLKLAMQNRIKLFYRPQGIAALDEKTVGQLSARRDVQGVTLNNRSPNHITITAIGTGE
CCEEEEEECCCEEEEECCCCCEECCHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCC
REQLLKATLMLAPFSQRHIAVSALPGSISTLSLSYLNDYGVKRQQAIPLN
HHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]