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The map label for this gene is yhjC [C]

Identifier: 238920398

GI number: 238920398

Start: 2409156

End: 2409929

Strand: Reverse

Name: yhjC [C]

Synonym: NT01EI_2508

Alternate gene names: 238920398

Gene position: 2409929-2409156 (Counterclockwise)

Preceding gene: 238920402

Following gene: 238920395

Centisome position: 63.21

GC content: 47.03

Gene sequence:

>774_bases
TTGGAGAATCAACTTAAATGTAAACTTTTTCTAAGAAGTAATAAAGGATATGAATTAACCCCTGTGGGGAATAGTGCTGT
TGATGAGGCGGAGAACGTTGAACGGGCCGTAGCATTGTTGGTCAAAAAGGTGACGGACTATGACCAACAGTTAAGTGGGG
ATGTTGTTATTTCTACTACCGACTCAGTCGCGGTCGACTTCATTACTACGGCAGTAAAAGAGTTAGGCATGTTGGCACCA
GGAATTAGAATCAAACTGGATGCGAGTACGGCGCTGTGTGATATGACACGCCGCGGTGTCGATATTGCTATTCGAAATAT
TCGACCTAATACGCCGGATCTGGTGACTAAGCAGCTATTGACCTCTCCGATGAAGCTGTATGCGAGTGCCGAATATGTGC
AGACACATGGGTATCCTGATGGCCCCTCGCCGCTGGATGATCGGGATGTGGTGATCTATGCGCCAATGCTGGCTCACTGT
TCAAGTACGTTGTTCGGATTGTCATTAGAACATGCGCGCATCGCATTTTTAGCGGATAGCAGCCTATTGCTCAGAGATGC
CATAAAGAAAGGGATCGGCGTAGGTTTTCTCCCGGCATTCATGGCGGAAAGAGATCATCTAGTCGCGCTTCTGGATGCGG
ATGAAACGAACAGTAACTATGAGCTATGGCTAGTGACCCATACGGACACACTGAATAGTGCACGGATACAAATCGTCATG
AAAACGTTGAACAAACTCTTTTATCCTTTCCAGAAATGGCCCACACCACGGTAG

Upstream 100 bases:

>100_bases
TACGCAGTACTTATTGGCATTAGCCAGAGAGAAAACTTTACGTAAAGCCGCCGCACGTTTATTTGTTGATCAGGCGACTG
TGGCGAGACGAATCGTAGTT

Downstream 100 bases:

>100_bases
ATGATCCCGCCCAATCGCTAGAGCGGCCATAGGTGCGTGCGGTGAGGCGTCGTTCTGCCTTATATGCCCCCGTCTGTGGC
CATCTTGCTGCATTTATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcription Regulator Protein; LysR-Family Transcriptional Regulator; LysR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Lysr Family; LysR Family Regulatory Protein; Transcriptional Regulator LysR Family Protein; Transcriptional Regulatory Protein LYSR Family; Transcriptional Regulator Protein Lysr Family; Lysr-Family Transcriptional Regulator; HTH-Type Transcriptional Regulator LysR-Family; LysR Family Regulatory Helix-Turn-Helix Protein; LysR Family Transcriptional Regulator Protein; HTH-Type Transcriptional Activator; Transcriptional Regulators Lysr Family; Transcription Regulator Protein Lysr; Transcription Regulator; Transcriptional Regulator Of LysR Family; Regulatory Protein LysR

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MENQLKCKLFLRSNKGYELTPVGNSAVDEAENVERAVALLVKKVTDYDQQLSGDVVISTTDSVAVDFITTAVKELGMLAP
GIRIKLDASTALCDMTRRGVDIAIRNIRPNTPDLVTKQLLTSPMKLYASAEYVQTHGYPDGPSPLDDRDVVIYAPMLAHC
SSTLFGLSLEHARIAFLADSSLLLRDAIKKGIGVGFLPAFMAERDHLVALLDADETNSNYELWLVTHTDTLNSARIQIVM
KTLNKLFYPFQKWPTPR

Sequences:

>Translated_257_residues
MENQLKCKLFLRSNKGYELTPVGNSAVDEAENVERAVALLVKKVTDYDQQLSGDVVISTTDSVAVDFITTAVKELGMLAP
GIRIKLDASTALCDMTRRGVDIAIRNIRPNTPDLVTKQLLTSPMKLYASAEYVQTHGYPDGPSPLDDRDVVIYAPMLAHC
SSTLFGLSLEHARIAFLADSSLLLRDAIKKGIGVGFLPAFMAERDHLVALLDADETNSNYELWLVTHTDTLNSARIQIVM
KTLNKLFYPFQKWPTPR
>Mature_257_residues
MENQLKCKLFLRSNKGYELTPVGNSAVDEAENVERAVALLVKKVTDYDQQLSGDVVISTTDSVAVDFITTAVKELGMLAP
GIRIKLDASTALCDMTRRGVDIAIRNIRPNTPDLVTKQLLTSPMKLYASAEYVQTHGYPDGPSPLDDRDVVIYAPMLAHC
SSTLFGLSLEHARIAFLADSSLLLRDAIKKGIGVGFLPAFMAERDHLVALLDADETNSNYELWLVTHTDTLNSARIQIVM
KTLNKLFYPFQKWPTPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28456; Mature: 28456

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQLKCKLFLRSNKGYELTPVGNSAVDEAENVERAVALLVKKVTDYDQQLSGDVVISTT
CCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
DSVAVDFITTAVKELGMLAPGIRIKLDASTALCDMTRRGVDIAIRNIRPNTPDLVTKQLL
CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
TSPMKLYASAEYVQTHGYPDGPSPLDDRDVVIYAPMLAHCSSTLFGLSLEHARIAFLADS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCEEECCEEEEEEECC
SLLLRDAIKKGIGVGFLPAFMAERDHLVALLDADETNSNYELWLVTHTDTLNSARIQIVM
HHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHH
KTLNKLFYPFQKWPTPR
HHHHHHHCCHHHCCCCC
>Mature Secondary Structure
MENQLKCKLFLRSNKGYELTPVGNSAVDEAENVERAVALLVKKVTDYDQQLSGDVVISTT
CCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
DSVAVDFITTAVKELGMLAPGIRIKLDASTALCDMTRRGVDIAIRNIRPNTPDLVTKQLL
CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
TSPMKLYASAEYVQTHGYPDGPSPLDDRDVVIYAPMLAHCSSTLFGLSLEHARIAFLADS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCEEECCEEEEEEECC
SLLLRDAIKKGIGVGFLPAFMAERDHLVALLDADETNSNYELWLVTHTDTLNSARIQIVM
HHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHH
KTLNKLFYPFQKWPTPR
HHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA