| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is hcp
Identifier: 238920390
GI number: 238920390
Start: 2395192
End: 2396847
Strand: Direct
Name: hcp
Synonym: NT01EI_2500
Alternate gene names: 238920390
Gene position: 2395192-2396847 (Clockwise)
Preceding gene: 238920388
Following gene: 238920391
Centisome position: 62.83
GC content: 63.1
Gene sequence:
>1656_bases ATGTACTGCGTTCAATGCGAGCAAACCATCCGTACCCCGGCCGGCAATGGCTGTTCCTACGCCCAAGGGATGTGCGGCAA GAGTGCTGAAACCTCCGACCTGCAAGACCTGCTGGTCGCCGCACTGCAAAGCCTCTCCGCCTGGGCGCTGCTGGCCCGCG AGCTGGATATCCGCGATCGCACCATCGACAGCTTTGCGCCGCGCGCCTTCTTCGCCACCCTGACCAACGTCAACTTCGAC TCTGCGCGCATCATCGGCTACGCCCGCGAGGCGCTGGCGATGCGCGACAGCCTGCGCACTGCGTGCCTGGCCAAGGCACC GGGCACGCAGTGCGACCATCCGCTGGCCGATCTGCGCCTGCAGGGAGAGGATGTGGCGACCCTGCGCCGCCAGGCGGCAG AGTTCGCCCTGGACAGCGATCGGGCCGAGATCGGCGACGATATCCACGGCCTGCGCATGCTCAGCCTATACGGTCTGAAA GGCGCCGCGGCCTATATGGAGCATGCCCATGTGCTGGGCCAGCATAGCGAGGCGATCTACGCCCAGTATCACCACTATAT GGCCTGGCTCGGCACCCGGCCGTGCGATATGGATACCCTGCTGGACAATGCCATGGGCATCGGCAAGATGAACTTCGCCA TCATGGCGCAGCTGGATAAGGGGGAGACCGAGGCCTACGGCGATCCCACCCCGACCTCCGTCAACGTGCGGCCGCTCGCC GGTAAATGCATCCTGATCTCCGGTCACGATCTGAAGGATCTGCAGATGCTGCTGGAGCAGACCGACGGCCTCGGGATCAA CGTCTATACCCACGGTGAAATGCTGCCGGCCCACGGCTATCCCGAACTGCGAAAATACCGCCACCTGGTCGGTAACTACG GCAGCGGCTGGCAGAATCAGCAGCAGGAGTTTGCCCGCTTCCCCGGCCCGATCCTGATGACCTCCAACTGCATCATCGAT CCCAACGTTGGCAACTACAGCGATCGCATCTGGACCCGCAGCATCGTCGGCTGGCCGGGCGTACGCCATCTGGAAGGCGA TGATTTCAGCCAGGTGATCGCCCAGGCGCAGGTCTGCGATGGCTTCCCCTACAGCGAGATCGAACACCTGATCACCGTCG GCTTTGGCCGCGCCACCCTGCTCAACGCGGCGGACAGCGTGATCGATCTGGTTGCCCAGAAAAAGCTGCGCCACGTATTT CTGCTCGGCGGCTGCGACGGCAGCCGCGATGAGCGCAGCTACTACACCGATTTTGCCCGCGCCATCCCACAGGATTGCCT GATCATGACCCTGGCCTGCGGTAAGTACCGTTTTAACAAGCTGGAGTTCGGCACGCTGGAGGGGCTGCCGCGCCTGCTGG ACGTCGGCCAGTGCAACGACGCCTACGGCGCCATCATGCTGGCGGTCAATCTGGCAGAGAAGCTCGGCTGCGGCATCAAC GATCTGCCGCTCAGTCTGATCCTCTCCTGGTTTGAGCAGAAGGCCATCGTCATCCTGCTGACCCTGCTGGCGCTGGGCGT CAAAAACATCTACACCGGGCCGACCGCACCGGGTTTCCTGACGGATAATCTTCTGGCGATCCTCAACCAGCGCTTCGGCA TGCGCGCCATCAGCACGGTCGACGCCGATCTGAACGGTATACTCGGCCACGCCTAA
Upstream 100 bases:
>100_bases AAACAAAGTAAAAGTTGCATTAAAAACTCCTTTTTCGAACGCGATGCCAGGATTACCTTTAAAAAGGCATAATAAATACA ACTTTAAAAGAGGGTTTTCC
Downstream 100 bases:
>100_bases CCCGGCAATCTGAAGTGCCCCGAGCCGTCTGGTACGGGGCGAAATACTGACTGCGAGACGCCATCACCATGACCATGCCA ACCCCCCTTTGCCCCCACCG
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDRTIDSFAPRAFFATLTNVNFD SARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRLQGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLK GAAAYMEHAHVLGQHSEAIYAQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQQQEFARFPGPILMTSNCIID PNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCDGFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVF LLGGCDGSRDERSYYTDFARAIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTVDADLNGILGHA
Sequences:
>Translated_551_residues MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDRTIDSFAPRAFFATLTNVNFD SARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRLQGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLK GAAAYMEHAHVLGQHSEAIYAQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQQQEFARFPGPILMTSNCIID PNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCDGFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVF LLGGCDGSRDERSYYTDFARAIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTVDADLNGILGHA >Mature_551_residues MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDRTIDSFAPRAFFATLTNVNFD SARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRLQGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLK GAAAYMEHAHVLGQHSEAIYAQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQQQEFARFPGPILMTSNCIID PNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCDGFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVF LLGGCDGSRDERSYYTDFARAIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTVDADLNGILGHA
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family
Homologues:
Organism=Escherichia coli, GI87081794, Length=548, Percent_Identity=74.6350364963504, Blast_Score=874, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HCP_EDWI9 (C5BEA9)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933905.1 - GeneID: 7958838 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_2500 - OMA: QEHIDMA - ProtClustDB: PRK05290 - GO: GO:0005737 - HAMAP: MF_00069 - InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 - Gene3D: G3DSA:3.40.50.2030 - Gene3D: G3DSA:1.20.1270.20 - PIRSF: PIRSF000076 - TIGRFAMs: TIGR01703
Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like
EC number: NA
Molecular weight: Translated: 60435; Mature: 60435
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDR CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TIDSFAPRAFFATLTNVNFDSARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRL HHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCEE QGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLKGAAAYMEHAHVLGQHSEAIY CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH AQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQ CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHH QQEFARFPGPILMTSNCIIDPNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCD HHHHHHCCCCEEEECCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC GFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVFLLGGCDGSRDERSYYTDFAR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHH AIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN HCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH DADLNGILGHA CCCHHHHCCCC >Mature Secondary Structure MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDR CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TIDSFAPRAFFATLTNVNFDSARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRL HHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCEE QGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLKGAAAYMEHAHVLGQHSEAIY CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH AQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQ CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHH QQEFARFPGPILMTSNCIIDPNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCD HHHHHHCCCCEEEECCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC GFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVFLLGGCDGSRDERSYYTDFAR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHH AIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN HCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH DADLNGILGHA CCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA