Click here to switch to the map view.

The map label for this gene is ybjX [H]

Identifier: 238920384

GI number: 238920384

Start: 2390333

End: 2391289

Strand: Direct

Name: ybjX [H]

Synonym: NT01EI_2494

Alternate gene names: 238920384

Gene position: 2390333-2391289 (Clockwise)

Preceding gene: 238920383

Following gene: 238920388

Centisome position: 62.7

GC content: 58.1

Gene sequence:

>957_bases
ATGTCGTCAATCGAAATCGGCCACGCCCGGCCCGCCTCACGCCCCGCTTTACCGCTGTTTTCCAGCCTGGCGACGGGCCG
TTACCGACCGAACCGTCTCTGGAATAAGGCCACTTTTCGCGCCAAGTTTACCCTGCGTGCGCTGCTGATGCCCGGCGATA
CCTACCGTCTGCTGAATATGTTGGCCGGACTGCCACAGCGTGATGCGATTCTACACTGCCAGCCTCGCCTACCGTGCCGT
CTGCACCATCCCTACCTGAGCGTACACCTTTCCCGTCCACAGATCGTTGAAGCGCTGACGGATCACTACCGCCTGCTGAG
CCAGCTGCTGCCGATGTCCCAATATCAGGCGCTGTATACTGGACAGACACTGACCCTGGCGACCCTATGCGGGAAAAACG
ACCAGATATACTCTCTACGATTGGCCATGCTGGAGAAGCTGAGCAAAGAGGGAGATCTCTCCATAGCACTATATGATCAA
AATGATATACTGCTTTCAGCCTGCACATTTAGTTTTATCGACTACAATGGCGCACAAACCCTCTTTATTGGCGGACTGCA
GGGGGCGTCGCCGTCGCTGCCTCACAGCCACACCCAAACAGCCACCAAAGCCTGCCACGGTCTGTTCCCCAAACGTCTGC
TGGCCGACGCCCTGTGTGAGCTGGCACGCATTGCCCGCTGCAGGCAGATCCTGGCCGTCGGCAACAACAGCCATATCTAC
AGCCACTGGCGCTACCGCCGCAAAAAACAGACGCAGATGGTGGCTGACTATGACGGTTTTTGGCTTTCACTGAACGGCAC
ACCCACCGGCGACGGTCACTTTCGCCTGCCACAGCCCCCGCAGCGCAAGTCTCTGGAGAGTATTCCGAGCAAAAAGCGCG
CCGAGTACCATCGCCGCTATCAGCTGCTGGATGAAATGCAGCAGGCGATATGCGCCAGCCTGGGTGCGACTGCATAG

Upstream 100 bases:

>100_bases
TCCGTCGATTCCATATGCAGTGAGGTAACATATTGTGCCGATGTTTAGGCGGGCTCCCGGAAAATTCTGTCATCGTTAAC
CCGCAATGACAGGTGGCACC

Downstream 100 bases:

>100_bases
CATCGTCTTGTCGCGCTAGACGCTGACCAGACGCGGCAGCACCTGCCACAGCCCGGCCACCAGCAGCGCTGGCCCAAATG
GCACGGGCTCCGCCAGACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSSIEIGHARPASRPALPLFSSLATGRYRPNRLWNKATFRAKFTLRALLMPGDTYRLLNMLAGLPQRDAILHCQPRLPCR
LHHPYLSVHLSRPQIVEALTDHYRLLSQLLPMSQYQALYTGQTLTLATLCGKNDQIYSLRLAMLEKLSKEGDLSIALYDQ
NDILLSACTFSFIDYNGAQTLFIGGLQGASPSLPHSHTQTATKACHGLFPKRLLADALCELARIARCRQILAVGNNSHIY
SHWRYRRKKQTQMVADYDGFWLSLNGTPTGDGHFRLPQPPQRKSLESIPSKKRAEYHRRYQLLDEMQQAICASLGATA

Sequences:

>Translated_318_residues
MSSIEIGHARPASRPALPLFSSLATGRYRPNRLWNKATFRAKFTLRALLMPGDTYRLLNMLAGLPQRDAILHCQPRLPCR
LHHPYLSVHLSRPQIVEALTDHYRLLSQLLPMSQYQALYTGQTLTLATLCGKNDQIYSLRLAMLEKLSKEGDLSIALYDQ
NDILLSACTFSFIDYNGAQTLFIGGLQGASPSLPHSHTQTATKACHGLFPKRLLADALCELARIARCRQILAVGNNSHIY
SHWRYRRKKQTQMVADYDGFWLSLNGTPTGDGHFRLPQPPQRKSLESIPSKKRAEYHRRYQLLDEMQQAICASLGATA
>Mature_317_residues
SSIEIGHARPASRPALPLFSSLATGRYRPNRLWNKATFRAKFTLRALLMPGDTYRLLNMLAGLPQRDAILHCQPRLPCRL
HHPYLSVHLSRPQIVEALTDHYRLLSQLLPMSQYQALYTGQTLTLATLCGKNDQIYSLRLAMLEKLSKEGDLSIALYDQN
DILLSACTFSFIDYNGAQTLFIGGLQGASPSLPHSHTQTATKACHGLFPKRLLADALCELARIARCRQILAVGNNSHIYS
HWRYRRKKQTQMVADYDGFWLSLNGTPTGDGHFRLPQPPQRKSLESIPSKKRAEYHRRYQLLDEMQQAICASLGATA

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=284, Percent_Identity=45.0704225352113, Blast_Score=258, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 35870; Mature: 35739

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIEIGHARPASRPALPLFSSLATGRYRPNRLWNKATFRAKFTLRALLMPGDTYRLLNM
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCHHEEEEEEEEEEECCCCHHHHHHH
LAGLPQRDAILHCQPRLPCRLHHPYLSVHLSRPQIVEALTDHYRLLSQLLPMSQYQALYT
HHCCCCCCCEEEECCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GQTLTLATLCGKNDQIYSLRLAMLEKLSKEGDLSIALYDQNDILLSACTFSFIDYNGAQT
CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHEECCCCCE
LFIGGLQGASPSLPHSHTQTATKACHGLFPKRLLADALCELARIARCRQILAVGNNSHIY
EEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SHWRYRRKKQTQMVADYDGFWLSLNGTPTGDGHFRLPQPPQRKSLESIPSKKRAEYHRRY
HHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEECCCCCHHHHHHHCCCHHHHHHHHHH
QLLDEMQQAICASLGATA
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSIEIGHARPASRPALPLFSSLATGRYRPNRLWNKATFRAKFTLRALLMPGDTYRLLNM
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCHHEEEEEEEEEEECCCCHHHHHHH
LAGLPQRDAILHCQPRLPCRLHHPYLSVHLSRPQIVEALTDHYRLLSQLLPMSQYQALYT
HHCCCCCCCEEEECCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GQTLTLATLCGKNDQIYSLRLAMLEKLSKEGDLSIALYDQNDILLSACTFSFIDYNGAQT
CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHEECCCCCE
LFIGGLQGASPSLPHSHTQTATKACHGLFPKRLLADALCELARIARCRQILAVGNNSHIY
EEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SHWRYRRKKQTQMVADYDGFWLSLNGTPTGDGHFRLPQPPQRKSLESIPSKKRAEYHRRY
HHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEECCCCCHHHHHHHCCCHHHHHHHHHH
QLLDEMQQAICASLGATA
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]