| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is aat
Identifier: 238920379
GI number: 238920379
Start: 2385568
End: 2386296
Strand: Direct
Name: aat
Synonym: NT01EI_2489
Alternate gene names: 238920379
Gene position: 2385568-2386296 (Clockwise)
Preceding gene: 238920378
Following gene: 238920380
Centisome position: 62.58
GC content: 63.51
Gene sequence:
>729_bases ATGCGCATTATGCAACTGGACAGACACTCGCTGGGATTCCCCTCGCCGGAGCAGGCGCTGCACGATCCCAACGGACTGCT GGCCATCGGTGGAGATCTGCAGCCGGCGCGCCTGCTGCAGGCCTATCAGCGCGGTATCTTTCCCTGGTTCTCTCCGGGAG AGCTGATCCTGTGGTGGTCGCCGGATCCGCGGGCGGTACTGGTACCGCAGGCGCTGCACATCAGCCATAGCCTGCGCAAG GCACTGCGCCGAACCACTCTGCGGATCACCCTGAATCAGGCTTTCGCCGCGGTGATCGCCGGGTGTGCGGAACAGCGCGC CGAAGGTACCTGGATCGGACCCTCGATACAGCAGGCCTACTGTCAGTTGCACCAACTGGGCCACGCCCATTCGGTGGAGG TTTGGCAAGAGGAACGCCTGGTGGGCGGGCTGTACGGCGTCGCCCAGGGCAGCCTGTTCTGCGGAGAGTCGATGTTCAGC CGGGTCAGCAATGCCTCTAAAATGGCTTTGTGGAGCTTCTGTAGCCACTTTCAGCGCATGGGCGGTCAACTCATCGACTG TCAGGTGCTCAACGCTCACACCGCGTCGCTGGGTGCCCATGACATTCCGCGCCGCCGCTATCTGCAGCATCTGCTCAACT GTCGTAGCCAGACGCTCGCCCCCCGCTGCTGGCTGCCGCAGAGCCTCACGCTCCCCCTTCCGGCCACGGCGACACAAATA GGAGAATAG
Upstream 100 bases:
>100_bases TCGAGCAGGGGCGCCATGAGCAGCTGCTACAAGCCCATGGCCGCTACTATCAACTGTGTCAGCGCCGTTAGATTAATTTC ACCGCGCGAGGAAATGGGAT
Downstream 100 bases:
>100_bases TGCCTCCGGGGGCTAAACGGGACCGTATCTCCCACCGCGCGCCGTGCCAGGCGGCGGCTCAGCGCCGTCGTCGTCTGACG CCAAACCCCGAGCGGGGCAC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MRIMQLDRHSLGFPSPEQALHDPNGLLAIGGDLQPARLLQAYQRGIFPWFSPGELILWWSPDPRAVLVPQALHISHSLRK ALRRTTLRITLNQAFAAVIAGCAEQRAEGTWIGPSIQQAYCQLHQLGHAHSVEVWQEERLVGGLYGVAQGSLFCGESMFS RVSNASKMALWSFCSHFQRMGGQLIDCQVLNAHTASLGAHDIPRRRYLQHLLNCRSQTLAPRCWLPQSLTLPLPATATQI GE
Sequences:
>Translated_242_residues MRIMQLDRHSLGFPSPEQALHDPNGLLAIGGDLQPARLLQAYQRGIFPWFSPGELILWWSPDPRAVLVPQALHISHSLRK ALRRTTLRITLNQAFAAVIAGCAEQRAEGTWIGPSIQQAYCQLHQLGHAHSVEVWQEERLVGGLYGVAQGSLFCGESMFS RVSNASKMALWSFCSHFQRMGGQLIDCQVLNAHTASLGAHDIPRRRYLQHLLNCRSQTLAPRCWLPQSLTLPLPATATQI GE >Mature_242_residues MRIMQLDRHSLGFPSPEQALHDPNGLLAIGGDLQPARLLQAYQRGIFPWFSPGELILWWSPDPRAVLVPQALHISHSLRK ALRRTTLRITLNQAFAAVIAGCAEQRAEGTWIGPSIQQAYCQLHQLGHAHSVEVWQEERLVGGLYGVAQGSLFCGESMFS RVSNASKMALWSFCSHFQRMGGQLIDCQVLNAHTASLGAHDIPRRRYLQHLLNCRSQTLAPRCWLPQSLTLPLPATATQI GE
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=232, Percent_Identity=64.6551724137931, Blast_Score=313, Evalue=5e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_EDWI9 (C5BE98)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933894.1 - GeneID: 7958827 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_2489 - OMA: GEPILWW - ProtClustDB: CLSK2813334 - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 26928; Mature: 26928
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIMQLDRHSLGFPSPEQALHDPNGLLAIGGDLQPARLLQAYQRGIFPWFSPGELILWWS CCCEECCCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEC PDPRAVLVPQALHISHSLRKALRRTTLRITLNQAFAAVIAGCAEQRAEGTWIGPSIQQAY CCCCEEECCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH CQLHQLGHAHSVEVWQEERLVGGLYGVAQGSLFCGESMFSRVSNASKMALWSFCSHFQRM HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH GGQLIDCQVLNAHTASLGAHDIPRRRYLQHLLNCRSQTLAPRCWLPQSLTLPLPATATQI CCEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC GE CC >Mature Secondary Structure MRIMQLDRHSLGFPSPEQALHDPNGLLAIGGDLQPARLLQAYQRGIFPWFSPGELILWWS CCCEECCCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEC PDPRAVLVPQALHISHSLRKALRRTTLRITLNQAFAAVIAGCAEQRAEGTWIGPSIQQAY CCCCEEECCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH CQLHQLGHAHSVEVWQEERLVGGLYGVAQGSLFCGESMFSRVSNASKMALWSFCSHFQRM HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH GGQLIDCQVLNAHTASLGAHDIPRRRYLQHLLNCRSQTLAPRCWLPQSLTLPLPATATQI CCEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC GE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA