| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is atzB [H]
Identifier: 238920333
GI number: 238920333
Start: 2333912
End: 2335282
Strand: Reverse
Name: atzB [H]
Synonym: NT01EI_2443
Alternate gene names: 238920333
Gene position: 2335282-2333912 (Counterclockwise)
Preceding gene: 238920334
Following gene: 238920330
Centisome position: 61.26
GC content: 64.99
Gene sequence:
>1371_bases ATGCACACGAAGAAGACGCTGGTGATTAAGAATGCCGATCTGCTGGTCACGATGGATGACCGGCGCCGGGAGATCCGCGG TGGCTGCATGCTGGTGGAGGGATGTCGTATTGTGGCGGTCGGCGGCAGCGAGCTGCTGGCCGCCGGCGCCGACGAGGAGC TGGATCTGCGCGGGCACGTGGTGATCCCGGGGATGGTCAACACCCATCACCATATGTTCCAGACCCTGACGCGTGCGCTG CCTGGCGCTCAGGACGCCGAGCTGTTCTCATGGCTGGAGACGCTGTACCCGGTATGGGGACGTCTGACGCCGGAGATGAT TTATATCTCGGCCCAGACGGCGATGGCGGAGCTGATGCTCTCCGGCTGCACGACCTCCAGCGACCACCTGTACCTGTTTC CCAACGGCTGTCGTCTGGATGACAGCATCGATGCGGCGCGTGAAATCGGTATGCGCTTTCACGCCTGTCGCGGCAGTATG AGTCTGGGACGCAGCCGCGGTGGCCTGCCGCCCGATGCGCTGGTAGAGCGTGAGGAGGCGATTCTGGAGGATTCGCTGCG GCTGATCCAGTCCTATCATGATGCGGCGCGCTTCAGCATGCTGCGGATCGCGCTGGCGCCTTGCTCCCCCTTTTCCGTCA GTCGGGAGCTGATGAAAAAGAGCGCGCAGCTGGCGCGTCAGCACGGGGTCTCGCTGCATACCCATCTGGCGGAGAATGAT AATGACGTCAGTTACAGTCAGCGCCACTTTGGTATGACTCCGGCGGAGTATGTGCGCGATCTGGGCTGGACTGGCCCGGA CGTCTGGCATGCACACTGCGTGAAGCTGGATGCGCAGGGGATCGATCTGTTTGCCCGCACCCAGACCGGGGTCGCCCACT GCCCATGCTCCAACATGCGTCTGGCGTCGGGGATCGCGCCGATCCGCCAGATGGTGGATGCCGGGGTGCCGGTCGGTATC GGCGTGGATGGTTCGGCTTCTAACGACGGCAGCTCCCTGCTGGCCGAGGCGCGTCAGGCGATGCTGCTGCAGCGGGTGGC CAGCGGGCCACAGGCCATGAGCGCGCGTGAGGCTCTGTGGCTGGCGACGCGGGGCGGGGCACAGGTCCTTAACCGTGACG ACATCGGCGCGCTGGCGCCGGACATGGCGGCGGACTTTGTCGCCTTTGATCTGCGCGGCCTGGGCACCGCCGGCGCCCGT CACGATCCGCTGGCAGCGCTGGTGTTCTGCAATCCGGGCAACGTGGCTCTCAGCGTGATCAATGGCCGGGTGGTGATCCG CGACGGTCAGCTGCAGACGATCGATCTGTCGCAGGTGATCGCGACGCATAACCGCCTGAGCACGTTGCTGCTGCACCCCG ATCCGCTGTAG
Upstream 100 bases:
>100_bases GGTGTTCAGATGCCGTAGACCGCCGCTGGGGGCTATGGCACCGTTAAATCAGCCGCGGAGCGGCGCATAGCGGATGCGCT CGCCTGCAGAGGGGAAAGCG
Downstream 100 bases:
>100_bases TCCTAGCGGGCGCGCCACAGCCAGCGGCGGCACAGCAGGTAGGTCGTCGCCGGCAGCAGCAGCAGGCAGGCGGTGGCGGT CAGCAGCGCCGTCGTGGTGC
Product: hydroxydechloroatrazine ethylaminohydrolase
Products: NA
Alternate protein names: Hydroxyatrazine hydrolase [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MHTKKTLVIKNADLLVTMDDRRREIRGGCMLVEGCRIVAVGGSELLAAGADEELDLRGHVVIPGMVNTHHHMFQTLTRAL PGAQDAELFSWLETLYPVWGRLTPEMIYISAQTAMAELMLSGCTTSSDHLYLFPNGCRLDDSIDAAREIGMRFHACRGSM SLGRSRGGLPPDALVEREEAILEDSLRLIQSYHDAARFSMLRIALAPCSPFSVSRELMKKSAQLARQHGVSLHTHLAEND NDVSYSQRHFGMTPAEYVRDLGWTGPDVWHAHCVKLDAQGIDLFARTQTGVAHCPCSNMRLASGIAPIRQMVDAGVPVGI GVDGSASNDGSSLLAEARQAMLLQRVASGPQAMSAREALWLATRGGAQVLNRDDIGALAPDMAADFVAFDLRGLGTAGAR HDPLAALVFCNPGNVALSVINGRVVIRDGQLQTIDLSQVIATHNRLSTLLLHPDPL
Sequences:
>Translated_456_residues MHTKKTLVIKNADLLVTMDDRRREIRGGCMLVEGCRIVAVGGSELLAAGADEELDLRGHVVIPGMVNTHHHMFQTLTRAL PGAQDAELFSWLETLYPVWGRLTPEMIYISAQTAMAELMLSGCTTSSDHLYLFPNGCRLDDSIDAAREIGMRFHACRGSM SLGRSRGGLPPDALVEREEAILEDSLRLIQSYHDAARFSMLRIALAPCSPFSVSRELMKKSAQLARQHGVSLHTHLAEND NDVSYSQRHFGMTPAEYVRDLGWTGPDVWHAHCVKLDAQGIDLFARTQTGVAHCPCSNMRLASGIAPIRQMVDAGVPVGI GVDGSASNDGSSLLAEARQAMLLQRVASGPQAMSAREALWLATRGGAQVLNRDDIGALAPDMAADFVAFDLRGLGTAGAR HDPLAALVFCNPGNVALSVINGRVVIRDGQLQTIDLSQVIATHNRLSTLLLHPDPL >Mature_456_residues MHTKKTLVIKNADLLVTMDDRRREIRGGCMLVEGCRIVAVGGSELLAAGADEELDLRGHVVIPGMVNTHHHMFQTLTRAL PGAQDAELFSWLETLYPVWGRLTPEMIYISAQTAMAELMLSGCTTSSDHLYLFPNGCRLDDSIDAAREIGMRFHACRGSM SLGRSRGGLPPDALVEREEAILEDSLRLIQSYHDAARFSMLRIALAPCSPFSVSRELMKKSAQLARQHGVSLHTHLAEND NDVSYSQRHFGMTPAEYVRDLGWTGPDVWHAHCVKLDAQGIDLFARTQTGVAHCPCSNMRLASGIAPIRQMVDAGVPVGI GVDGSASNDGSSLLAEARQAMLLQRVASGPQAMSAREALWLATRGGAQVLNRDDIGALAPDMAADFVAFDLRGLGTAGAR HDPLAALVFCNPGNVALSVINGRVVIRDGQLQTIDLSQVIATHNRLSTLLLHPDPL
Specific function: Catalyzes the deamination reaction of hydroxyatrazine to N-isopropylammelide (dihydroxy-isopropyl-atrazine). The enzyme is also capable of catalyzing some dechlorinating reactions [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=330, Percent_Identity=24.2424242424242, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1789249, Length=453, Percent_Identity=28.476821192053, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI87082177, Length=450, Percent_Identity=23.7777777777778, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17540282, Length=385, Percent_Identity=24.4155844155844, Blast_Score=94, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319963, Length=321, Percent_Identity=26.4797507788162, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI24643849, Length=357, Percent_Identity=24.9299719887955, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.99.3 [H]
Molecular weight: Translated: 49360; Mature: 49360
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTKKTLVIKNADLLVTMDDRRREIRGGCMLVEGCRIVAVGGSELLAAGADEELDLRGHV CCCCEEEEEECCCEEEEECHHHHHHCCCEEEEECCEEEEECCCHHEECCCCCCCCCCCCE VIPGMVNTHHHMFQTLTRALPGAQDAELFSWLETLYPVWGRLTPEMIYISAQTAMAELML EECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHH SGCTTSSDHLYLFPNGCRLDDSIDAAREIGMRFHACRGSMSLGRSRGGLPPDALVEREEA HCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHH ILEDSLRLIQSYHDAARFSMLRIALAPCSPFSVSRELMKKSAQLARQHGVSLHTHLAEND HHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC NDVSYSQRHFGMTPAEYVRDLGWTGPDVWHAHCVKLDAQGIDLFARTQTGVAHCPCSNMR CCCCHHHHHCCCCHHHHHHHCCCCCCCHHEEEEEEEECCCCEEEEECCCCCEECCCCCCC LASGIAPIRQMVDAGVPVGIGVDGSASNDGSSLLAEARQAMLLQRVASGPQAMSAREALW HHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEE LATRGGAQVLNRDDIGALAPDMAADFVAFDLRGLGTAGARHDPLAALVFCNPGNVALSVI EEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEE NGRVVIRDGQLQTIDLSQVIATHNRLSTLLLHPDPL CCEEEEECCCEEEEEHHHHHHHHHHHEEEEECCCCC >Mature Secondary Structure MHTKKTLVIKNADLLVTMDDRRREIRGGCMLVEGCRIVAVGGSELLAAGADEELDLRGHV CCCCEEEEEECCCEEEEECHHHHHHCCCEEEEECCEEEEECCCHHEECCCCCCCCCCCCE VIPGMVNTHHHMFQTLTRALPGAQDAELFSWLETLYPVWGRLTPEMIYISAQTAMAELML EECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHH SGCTTSSDHLYLFPNGCRLDDSIDAAREIGMRFHACRGSMSLGRSRGGLPPDALVEREEA HCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHH ILEDSLRLIQSYHDAARFSMLRIALAPCSPFSVSRELMKKSAQLARQHGVSLHTHLAEND HHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC NDVSYSQRHFGMTPAEYVRDLGWTGPDVWHAHCVKLDAQGIDLFARTQTGVAHCPCSNMR CCCCHHHHHCCCCHHHHHHHCCCCCCCHHEEEEEEEECCCCEEEEECCCCCEECCCCCCC LASGIAPIRQMVDAGVPVGIGVDGSASNDGSSLLAEARQAMLLQRVASGPQAMSAREALW HHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEE LATRGGAQVLNRDDIGALAPDMAADFVAFDLRGLGTAGARHDPLAALVFCNPGNVALSVI EEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEE NGRVVIRDGQLQTIDLSQVIATHNRLSTLLLHPDPL CCEEEEECCCEEEEEHHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055410 [H]