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The map label for this gene is fliF [H]

Identifier: 238920311

GI number: 238920311

Start: 2310835

End: 2312544

Strand: Direct

Name: fliF [H]

Synonym: NT01EI_2421

Alternate gene names: 238920311

Gene position: 2310835-2312544 (Clockwise)

Preceding gene: 238920306

Following gene: 238920312

Centisome position: 60.62

GC content: 59.53

Gene sequence:

>1710_bases
ATGAACGCTTCAGCCACCGGTACCGCTGGCACCGCAGCAAAAAGCGCTGAGAATAGTATTAAAGCCATACTGGAGCGCGT
ACGGGCCAATCCCAAAATTCCCTTACTGTTGGCCAGCGCCGTCGCCATCGCCATCGTGGTTGTTTTGGCGCTTTGGGCGC
GCGCGCCCGATTATCGGGTACTGTACAGCAACATTAGCGATCGCGACGGCGGCGCTATTGTCACACAGCTGACACAGATG
AATATCCCCTATCGCTTTGCCAATAACGGCACCACGCTGATGGTGCCAGCCTCAGACGTGTATGCAACACGCCTGAAACT
GGCCCAGCAGGGGCTGCCAAGAGGCGGGGCCGTCGGCTTTGAGCTGCTCGACCAGGAGAAATTTGGTATCAGCCAGTTCA
GTGAACAGGTGAACTACCAGCGGGCTCTGGAAGGCGAACTGGCCAGAACCATCGAAACACTCGGACCGGTCGTCAGCGCC
CGCGTGCTGCTGGCCGAACCCAAACCCTCTCTGTTTGTGCGTGAGCAGAAGCAACCCTCCGCTTCCGTGACCCTGACCCT
GGAGCCGGGACGCGTATTGGATGACGGCCAAATCAACGCCATTGTCTATATGGTCTCCAGTAGTGTCGCCGGATTACCCC
CGGGCAATGTCACCGTCGTCGACCAGTACGGCCATCTGCTGAGCCAGCCTGATGGTACCGGGCGTGATCTGAATGCCGCT
CAGCTGAAATTTACCGCAGAGGTGGAGAGCCGCTTACAACGCCGCATTGAAACCATTCTGCAACCGATGCTCGGCAACGG
TAACGTACATGCGCAGGTCACCGCTCAGCTGGACTTCGCCAGCCGCGAGCAGACCGACGAAGAGTACACGCCGAATCAGC
CACCGAATCAGGCCGCGGTACGCAGCAAACAGATCAATCAGAGCGATCAGTCTGGCGGTCTGCAAAGCGGCGGGGTCCCG
GGTGCGCTGTCCAATGAACCGGCGCCTGCCCCCACCGGCCACATCAACGGTAAGCCACGCAGTGCCCAGGGTGGCAACGG
TGCAGCCAACCGCAGCAATGCCGTCAGTAACAACGGTCGCCAGAGCAGCCGTAGTGAGAACTTCCGCCGTGATGAGACCA
TCAACTATGAGGTGGATAGAACCATTCGTCACACCAAGGCACGCGCCGGCACCATCGAGCGTCTTTCCGTTGCCGTTGTT
GTCAATTATGCCAGCGACACCAAGGGTAAAGAGGTCGCCCTCAGCCAGCAGAAGATGGACCAGATCAATAATCTGGTACG
TGAAGCCATGGGCTTCTCCCAAAGCCGTGGCGATACCCTCAGCGTCGTCAACACGCCATTTAACAGCGTGGAAGATAATG
GCGGTGAACTGCCCTTCTGGCAGAAGCAAGCCTTTATCGATTTGCTGACTACCCTGGGACGCTATCTGCTGGTCGCCCTG
GTCGCCTGGCTGCTGTGGCGCAAGCTGGTTAAACCGCTGCTGACCAAACAGCAGCAGGCTGCCGCTGCCGCGCAGCAACG
CGCCGACACCCCGCCGCTATCGGCGCAGCCGTCCAAGCAGCTGAGCAATGAGGAGCTGCAGCAGCGTCGTAAGCTGCAGC
AGCGCAGCACCGCCGAAGCGCAGACCGAGCGCGTACGCGAAATGGCCGAACAGGATCCGCGCGTCGTGGCGCTGGTGATC
CGCCAATGGATGAGCACAGAACAACAATGA

Upstream 100 bases:

>100_bases
TTTTCCGCGATTCGCATTGCCGCGTCAGGGAGTCTGATTTGTTACACATCCATTCATACCGGCCTCAAGTCCGGACGCAA
CTGAACAATAAGGTAAGCCC

Downstream 100 bases:

>100_bases
GCCTGACTGCAACCGAAAAAAGCGCGGTACTTTTGATGACCATCGGCGAAGACCGCGCCGCCGAAGTGTTTAAACACCTC
TCTAACCGGGAGGTACAACA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MNASATGTAGTAAKSAENSIKAILERVRANPKIPLLLASAVAIAIVVVLALWARAPDYRVLYSNISDRDGGAIVTQLTQM
NIPYRFANNGTTLMVPASDVYATRLKLAQQGLPRGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVVSA
RVLLAEPKPSLFVREQKQPSASVTLTLEPGRVLDDGQINAIVYMVSSSVAGLPPGNVTVVDQYGHLLSQPDGTGRDLNAA
QLKFTAEVESRLQRRIETILQPMLGNGNVHAQVTAQLDFASREQTDEEYTPNQPPNQAAVRSKQINQSDQSGGLQSGGVP
GALSNEPAPAPTGHINGKPRSAQGGNGAANRSNAVSNNGRQSSRSENFRRDETINYEVDRTIRHTKARAGTIERLSVAVV
VNYASDTKGKEVALSQQKMDQINNLVREAMGFSQSRGDTLSVVNTPFNSVEDNGGELPFWQKQAFIDLLTTLGRYLLVAL
VAWLLWRKLVKPLLTKQQQAAAAAQQRADTPPLSAQPSKQLSNEELQQRRKLQQRSTAEAQTERVREMAEQDPRVVALVI
RQWMSTEQQ

Sequences:

>Translated_569_residues
MNASATGTAGTAAKSAENSIKAILERVRANPKIPLLLASAVAIAIVVVLALWARAPDYRVLYSNISDRDGGAIVTQLTQM
NIPYRFANNGTTLMVPASDVYATRLKLAQQGLPRGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVVSA
RVLLAEPKPSLFVREQKQPSASVTLTLEPGRVLDDGQINAIVYMVSSSVAGLPPGNVTVVDQYGHLLSQPDGTGRDLNAA
QLKFTAEVESRLQRRIETILQPMLGNGNVHAQVTAQLDFASREQTDEEYTPNQPPNQAAVRSKQINQSDQSGGLQSGGVP
GALSNEPAPAPTGHINGKPRSAQGGNGAANRSNAVSNNGRQSSRSENFRRDETINYEVDRTIRHTKARAGTIERLSVAVV
VNYASDTKGKEVALSQQKMDQINNLVREAMGFSQSRGDTLSVVNTPFNSVEDNGGELPFWQKQAFIDLLTTLGRYLLVAL
VAWLLWRKLVKPLLTKQQQAAAAAQQRADTPPLSAQPSKQLSNEELQQRRKLQQRSTAEAQTERVREMAEQDPRVVALVI
RQWMSTEQQ
>Mature_569_residues
MNASATGTAGTAAKSAENSIKAILERVRANPKIPLLLASAVAIAIVVVLALWARAPDYRVLYSNISDRDGGAIVTQLTQM
NIPYRFANNGTTLMVPASDVYATRLKLAQQGLPRGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVVSA
RVLLAEPKPSLFVREQKQPSASVTLTLEPGRVLDDGQINAIVYMVSSSVAGLPPGNVTVVDQYGHLLSQPDGTGRDLNAA
QLKFTAEVESRLQRRIETILQPMLGNGNVHAQVTAQLDFASREQTDEEYTPNQPPNQAAVRSKQINQSDQSGGLQSGGVP
GALSNEPAPAPTGHINGKPRSAQGGNGAANRSNAVSNNGRQSSRSENFRRDETINYEVDRTIRHTKARAGTIERLSVAVV
VNYASDTKGKEVALSQQKMDQINNLVREAMGFSQSRGDTLSVVNTPFNSVEDNGGELPFWQKQAFIDLLTTLGRYLLVAL
VAWLLWRKLVKPLLTKQQQAAAAAQQRADTPPLSAQPSKQLSNEELQQRRKLQQRSTAEAQTERVREMAEQDPRVVALVI
RQWMSTEQQ

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=570, Percent_Identity=61.2280701754386, Blast_Score=662, Evalue=0.0,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61915; Mature: 61915

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASATGTAGTAAKSAENSIKAILERVRANPKIPLLLASAVAIAIVVVLALWARAPDYRV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
LYSNISDRDGGAIVTQLTQMNIPYRFANNGTTLMVPASDVYATRLKLAQQGLPRGGAVGF
EECCCCCCCCCHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCHH
ELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVVSARVLLAEPKPSLFVREQKQPS
HHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCC
ASVTLTLEPGRVLDDGQINAIVYMVSSSVAGLPPGNVTVVDQYGHLLSQPDGTGRDLNAA
CEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEECHHHHHCCCCCCCCCCCHH
QLKFTAEVESRLQRRIETILQPMLGNGNVHAQVTAQLDFASREQTDEEYTPNQPPNQAAV
HEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCHHHH
RSKQINQSDQSGGLQSGGVPGALSNEPAPAPTGHINGKPRSAQGGNGAANRSNAVSNNGR
HHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSSRSENFRRDETINYEVDRTIRHTKARAGTIERLSVAVVVNYASDTKGKEVALSQQKMD
CCHHHHCCCCCCCCCEEHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCCHHHHHHHHHH
QINNLVREAMGFSQSRGDTLSVVNTPFNSVEDNGGELPFWQKQAFIDLLTTLGRYLLVAL
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAWLLWRKLVKPLLTKQQQAAAAAQQRADTPPLSAQPSKQLSNEELQQRRKLQQRSTAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QTERVREMAEQDPRVVALVIRQWMSTEQQ
HHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNASATGTAGTAAKSAENSIKAILERVRANPKIPLLLASAVAIAIVVVLALWARAPDYRV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
LYSNISDRDGGAIVTQLTQMNIPYRFANNGTTLMVPASDVYATRLKLAQQGLPRGGAVGF
EECCCCCCCCCHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCHH
ELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVVSARVLLAEPKPSLFVREQKQPS
HHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCC
ASVTLTLEPGRVLDDGQINAIVYMVSSSVAGLPPGNVTVVDQYGHLLSQPDGTGRDLNAA
CEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEECHHHHHCCCCCCCCCCCHH
QLKFTAEVESRLQRRIETILQPMLGNGNVHAQVTAQLDFASREQTDEEYTPNQPPNQAAV
HEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCHHHH
RSKQINQSDQSGGLQSGGVPGALSNEPAPAPTGHINGKPRSAQGGNGAANRSNAVSNNGR
HHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSSRSENFRRDETINYEVDRTIRHTKARAGTIERLSVAVVVNYASDTKGKEVALSQQKMD
CCHHHHCCCCCCCCCEEHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCCHHHHHHHHHH
QINNLVREAMGFSQSRGDTLSVVNTPFNSVEDNGGELPFWQKQAFIDLLTTLGRYLLVAL
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAWLLWRKLVKPLLTKQQQAAAAAQQRADTPPLSAQPSKQLSNEELQQRRKLQQRSTAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QTERVREMAEQDPRVVALVIRQWMSTEQQ
HHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]