Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920308

Identifier: 238920308

GI number: 238920308

Start: 2309553

End: 2309849

Strand: Reverse

Name: 238920308

Synonym: NT01EI_2418

Alternate gene names: NA

Gene position: 2309849-2309553 (Counterclockwise)

Preceding gene: 238920309

Following gene: 238920307

Centisome position: 60.59

GC content: 61.95

Gene sequence:

>297_bases
ATGCGTTGGCTCGGCCTATTCGCGCCGCTGCTATTATTGAGCGCCTGCAGCAGCGCGCCGGGGCATTTTGTCCGCAGTGA
GGAGGACCCGGTATCGCATTCGCTGGTCTATCGCTTCGATCCCGGGATTGTCGATCGGGCCGCAATGCAGGCCGATGCAT
TGGCCTATTGCCGCAGACACGGCTTTGATCGTGCCCATGAGGTCGGCCCGCTGAAGCCGAGCGCAACGGGGTTGACGCGG
GCGGCCTACCTGTGCGTTTATCAGGCGGTGCGGGCACAGGTCGTGGTGAAAAAATAA

Upstream 100 bases:

>100_bases
AGTGGCTACCGATAGCGGCGCCATTGTAGCACCATCCAGTTACACGAGCGCGGGGAACTACGTCGCCGCGCGATCCGATA
TATCCCGTAAGGAGAGTATT

Downstream 100 bases:

>100_bases
TCTTATTTTCTGTGTAATCCGTCGCTGGTGAGCTGACGGTAAATGCAATAGGGCTATCACTGTCGTGATAGTTGATGCCG
ATTGCTCATGGCTACCCGCT

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRHGFDRAHEVGPLKPSATGLTR
AAYLCVYQAVRAQVVVKK

Sequences:

>Translated_98_residues
MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRHGFDRAHEVGPLKPSATGLTR
AAYLCVYQAVRAQVVVKK
>Mature_98_residues
MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRHGFDRAHEVGPLKPSATGLTR
AAYLCVYQAVRAQVVVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10785; Mature: 10785

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRH
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC
GFDRAHEVGPLKPSATGLTRAAYLCVYQAVRAQVVVKK
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRH
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC
GFDRAHEVGPLKPSATGLTRAAYLCVYQAVRAQVVVKK
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA