| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920308
Identifier: 238920308
GI number: 238920308
Start: 2309553
End: 2309849
Strand: Reverse
Name: 238920308
Synonym: NT01EI_2418
Alternate gene names: NA
Gene position: 2309849-2309553 (Counterclockwise)
Preceding gene: 238920309
Following gene: 238920307
Centisome position: 60.59
GC content: 61.95
Gene sequence:
>297_bases ATGCGTTGGCTCGGCCTATTCGCGCCGCTGCTATTATTGAGCGCCTGCAGCAGCGCGCCGGGGCATTTTGTCCGCAGTGA GGAGGACCCGGTATCGCATTCGCTGGTCTATCGCTTCGATCCCGGGATTGTCGATCGGGCCGCAATGCAGGCCGATGCAT TGGCCTATTGCCGCAGACACGGCTTTGATCGTGCCCATGAGGTCGGCCCGCTGAAGCCGAGCGCAACGGGGTTGACGCGG GCGGCCTACCTGTGCGTTTATCAGGCGGTGCGGGCACAGGTCGTGGTGAAAAAATAA
Upstream 100 bases:
>100_bases AGTGGCTACCGATAGCGGCGCCATTGTAGCACCATCCAGTTACACGAGCGCGGGGAACTACGTCGCCGCGCGATCCGATA TATCCCGTAAGGAGAGTATT
Downstream 100 bases:
>100_bases TCTTATTTTCTGTGTAATCCGTCGCTGGTGAGCTGACGGTAAATGCAATAGGGCTATCACTGTCGTGATAGTTGATGCCG ATTGCTCATGGCTACCCGCT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRHGFDRAHEVGPLKPSATGLTR AAYLCVYQAVRAQVVVKK
Sequences:
>Translated_98_residues MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRHGFDRAHEVGPLKPSATGLTR AAYLCVYQAVRAQVVVKK >Mature_98_residues MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRHGFDRAHEVGPLKPSATGLTR AAYLCVYQAVRAQVVVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10785; Mature: 10785
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRH CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC GFDRAHEVGPLKPSATGLTRAAYLCVYQAVRAQVVVKK CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRWLGLFAPLLLLSACSSAPGHFVRSEEDPVSHSLVYRFDPGIVDRAAMQADALAYCRRH CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC GFDRAHEVGPLKPSATGLTRAAYLCVYQAVRAQVVVKK CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA