Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920235

Identifier: 238920235

GI number: 238920235

Start: 2241649

End: 2242152

Strand: Reverse

Name: 238920235

Synonym: NT01EI_2344

Alternate gene names: NA

Gene position: 2242152-2241649 (Counterclockwise)

Preceding gene: 238920239

Following gene: 238920228

Centisome position: 58.81

GC content: 63.29

Gene sequence:

>504_bases
ATGAGTAAAGCCGTTCTATGGCTGGGTGCCAGCCTGGTGGCACTGTACGTTGGCGGCGCGGCGGCGGAGTCCAACACCTT
CGTGGCGGCCGATGCACTGCAGCCCGCTGCCGCATCGCGCTCCACCGCACCGTCCAACGCGCCGCAGGCGCAGATTAAGG
TTCCCACTGCCAGCCTGCGCTATATGCAGGCGCTGCAGCTGGTGTTTTATCATGATGTCTATCGGCGCTGTAATCAGCAA
AATAGCCCGTCGCCGCTGTATAGCGCCACGGTAGACGCGCTGCGTACGGTGACATCGCTGGGGGAGAAGAACCGCCTGAC
GGATCTGCTGTATAACGAGATGGCGGGTAATGCGCTGGGGATGGCGATGGCCAGCGATCCGGATCGCCAGCGCTGCGCCG
TGGCAGGCAATATTTATCAGCAGCTGTTGAACAGCGACGCGCCCGGCGTCCTGCAGCAGGTGTTCCGCCTGCAGCTGCCG
GCCGATGAGCCACCCCACGCCTAA

Upstream 100 bases:

>100_bases
ACAGACTGATACAGAATGGTTGCCGCCACAACAGATGGACGCTTTCATTGTATCATCGACGCATTAGGATAGTAGCAGAC
TGTTTTTAGGGGAAAGAATA

Downstream 100 bases:

>100_bases
CGTAGCGTTTAGGCCAGCCCCAGCTCTTTGGCTGCGCTGGCGATGATCGCCAGCGCCCGCCGGATCTTCACTTCAGACAG
GGCGCTAAATCCAAACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSKAVLWLGASLVALYVGGAAAESNTFVAADALQPAAASRSTAPSNAPQAQIKVPTASLRYMQALQLVFYHDVYRRCNQQ
NSPSPLYSATVDALRTVTSLGEKNRLTDLLYNEMAGNALGMAMASDPDRQRCAVAGNIYQQLLNSDAPGVLQQVFRLQLP
ADEPPHA

Sequences:

>Translated_167_residues
MSKAVLWLGASLVALYVGGAAAESNTFVAADALQPAAASRSTAPSNAPQAQIKVPTASLRYMQALQLVFYHDVYRRCNQQ
NSPSPLYSATVDALRTVTSLGEKNRLTDLLYNEMAGNALGMAMASDPDRQRCAVAGNIYQQLLNSDAPGVLQQVFRLQLP
ADEPPHA
>Mature_166_residues
SKAVLWLGASLVALYVGGAAAESNTFVAADALQPAAASRSTAPSNAPQAQIKVPTASLRYMQALQLVFYHDVYRRCNQQN
SPSPLYSATVDALRTVTSLGEKNRLTDLLYNEMAGNALGMAMASDPDRQRCAVAGNIYQQLLNSDAPGVLQQVFRLQLPA
DEPPHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17878; Mature: 17747

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAVLWLGASLVALYVGGAAAESNTFVAADALQPAAASRSTAPSNAPQAQIKVPTASLR
CCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCEEECCHHHHH
YMQALQLVFYHDVYRRCNQQNSPSPLYSATVDALRTVTSLGEKNRLTDLLYNEMAGNALG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH
MAMASDPDRQRCAVAGNIYQQLLNSDAPGVLQQVFRLQLPADEPPHA
HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKAVLWLGASLVALYVGGAAAESNTFVAADALQPAAASRSTAPSNAPQAQIKVPTASLR
CCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCEEECCHHHHH
YMQALQLVFYHDVYRRCNQQNSPSPLYSATVDALRTVTSLGEKNRLTDLLYNEMAGNALG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH
MAMASDPDRQRCAVAGNIYQQLLNSDAPGVLQQVFRLQLPADEPPHA
HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA