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The map label for this gene is intE [H]

Identifier: 238920205

GI number: 238920205

Start: 2211414

End: 2212547

Strand: Direct

Name: intE [H]

Synonym: NT01EI_2314

Alternate gene names: 238920205

Gene position: 2211414-2212547 (Clockwise)

Preceding gene: 238920204

Following gene: 238920207

Centisome position: 58.01

GC content: 49.82

Gene sequence:

>1134_bases
ATGGCTGCCAGACCACGAACCCACAAAATAACCATCCCCAATCTGTACTCAAAGTTAGATAAGCGTACCGGACGCGTATA
TTGGCAATACAAGCACCCCGTAACGGGTAATTTTCACAGCCTGGGTACCAATACAGAGGAAGCCAAACAGGTCGCCAGTG
AGGCAAACGACATTATCGCAGAGCAGCGTACCCGGCAGATCCTCAGCGTTAACGAAAAAATCGCCCGTATGCGTGAGTCC
AGAGAGTTTATCACCGTCACAACATGGCTAGATCGTTACCTTGAAATCCAGCAAGAACGGCTTGAATCAGGCGAAATAAA
AATCAACTCCGTTAAGCAAAAGAAGAAGCCTGTCGAATTATTGCGCCAATGTTCTGGGATGCTTTATCTGAAAGATGTTA
CTGCGTTGGAAGTAGCAGAAATCATTGATGCCGTGAAAGCACAGGGACATAGCCGTATGGCTCAGGTCGTCAGGATGGCT
ATCATTGACGTTTTTAAAGAGGCGCAACACGCGGGGCACGTACCGCCAGGCTATAACCCGGCACAGGCAACAAAACAACC
CCGGAACAGAGTGATGCGCCAGCGCTTATCGCTTGATGAGTGGAAAACCATTTATTCTGCGGCTGAACGACATCCCCCCT
ACCTCCAGTGTGCCATGTTGTTGGCTTTGGTGACTGGCCAGCGGATCGGTGACATTTCTAATATGAAGTTTTCTGATATT
TGGGACGACATGTTGCACGTCACCCAAGAGAAAACAGGGGCACGTCTGGCTATCCCACTGGCTCTTACCTGCGTGGCGCT
CAATATTTCACTGAGGGACGTCGTGACTCAATGTAGAGATGCGGTACTGAGCCAGTATCTGGTGCATTTTCGGCACACCA
CATCACAAGCAACGCGGGGGGATAGGGTTTCACCTAATGCCATCACAACCACCTTTAAAAAAGCCAGGAACCGCAGCGGT
ATAACCTGGCCGGAGGGAACCGCGCCCACTTTCCATGAACAACGCTCTCTGTCTGAACGACTCTACCGGGAGCAGGGACT
GGAGACACAAAAACTGCTGGGACATAAGTCACAGAAAATGACGGATAAATATAACGATGACCGAGGGAAAGAATGGATGG
TTATTGCCGTTTAG

Upstream 100 bases:

>100_bases
AGAAAGTGGATGATTGATCGTGACGCCCGATTTATCGGCATTTTAGCTGAACCCAAAATCGCACCGACAGCAAACCCCGC
GTTGAAGAGGATTATTGCAG

Downstream 100 bases:

>100_bases
CAGCAAGCTCTCTCATTCTCGCTTGCATTGATATGAGCACCCGAAAGTTGATTATTTTTTGTACAGTTTTGGGGAAGAGT
TTTGGGGAAGTTTTGGGGAA

Product: prophage lambda integrase

Products: NA

Alternate protein names: Int(Lambda); Prophage e14 integrase [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAARPRTHKITIPNLYSKLDKRTGRVYWQYKHPVTGNFHSLGTNTEEAKQVASEANDIIAEQRTRQILSVNEKIARMRES
REFITVTTWLDRYLEIQQERLESGEIKINSVKQKKKPVELLRQCSGMLYLKDVTALEVAEIIDAVKAQGHSRMAQVVRMA
IIDVFKEAQHAGHVPPGYNPAQATKQPRNRVMRQRLSLDEWKTIYSAAERHPPYLQCAMLLALVTGQRIGDISNMKFSDI
WDDMLHVTQEKTGARLAIPLALTCVALNISLRDVVTQCRDAVLSQYLVHFRHTTSQATRGDRVSPNAITTTFKKARNRSG
ITWPEGTAPTFHEQRSLSERLYREQGLETQKLLGHKSQKMTDKYNDDRGKEWMVIAV

Sequences:

>Translated_377_residues
MAARPRTHKITIPNLYSKLDKRTGRVYWQYKHPVTGNFHSLGTNTEEAKQVASEANDIIAEQRTRQILSVNEKIARMRES
REFITVTTWLDRYLEIQQERLESGEIKINSVKQKKKPVELLRQCSGMLYLKDVTALEVAEIIDAVKAQGHSRMAQVVRMA
IIDVFKEAQHAGHVPPGYNPAQATKQPRNRVMRQRLSLDEWKTIYSAAERHPPYLQCAMLLALVTGQRIGDISNMKFSDI
WDDMLHVTQEKTGARLAIPLALTCVALNISLRDVVTQCRDAVLSQYLVHFRHTTSQATRGDRVSPNAITTTFKKARNRSG
ITWPEGTAPTFHEQRSLSERLYREQGLETQKLLGHKSQKMTDKYNDDRGKEWMVIAV
>Mature_376_residues
AARPRTHKITIPNLYSKLDKRTGRVYWQYKHPVTGNFHSLGTNTEEAKQVASEANDIIAEQRTRQILSVNEKIARMRESR
EFITVTTWLDRYLEIQQERLESGEIKINSVKQKKKPVELLRQCSGMLYLKDVTALEVAEIIDAVKAQGHSRMAQVVRMAI
IDVFKEAQHAGHVPPGYNPAQATKQPRNRVMRQRLSLDEWKTIYSAAERHPPYLQCAMLLALVTGQRIGDISNMKFSDIW
DDMLHVTQEKTGARLAIPLALTCVALNISLRDVVTQCRDAVLSQYLVHFRHTTSQATRGDRVSPNAITTTFKKARNRSGI
TWPEGTAPTFHEQRSLSERLYREQGLETQKLLGHKSQKMTDKYNDDRGKEWMVIAV

Specific function: Integrase from the cryptic lambdoic prophage e14. Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the h

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1787386, Length=377, Percent_Identity=59.6816976127321, Blast_Score=463, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016177
- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR015094
- InterPro:   IPR023109
- InterPro:   IPR013087 [H]

Pfam domain/function: PF09003 Phage_integ_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43161; Mature: 43030

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARPRTHKITIPNLYSKLDKRTGRVYWQYKHPVTGNFHSLGTNTEEAKQVASEANDIIA
CCCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EQRTRQILSVNEKIARMRESREFITVTTWLDRYLEIQQERLESGEIKINSVKQKKKPVEL
HHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
LRQCSGMLYLKDVTALEVAEIIDAVKAQGHSRMAQVVRMAIIDVFKEAQHAGHVPPGYNP
HHHHCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AQATKQPRNRVMRQRLSLDEWKTIYSAAERHPPYLQCAMLLALVTGQRIGDISNMKFSDI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCHHHH
WDDMLHVTQEKTGARLAIPLALTCVALNISLRDVVTQCRDAVLSQYLVHFRHTTSQATRG
HHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRVSPNAITTTFKKARNRSGITWPEGTAPTFHEQRSLSERLYREQGLETQKLLGHKSQKM
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHH
TDKYNDDRGKEWMVIAV
HHHCCCCCCCEEEEEEC
>Mature Secondary Structure 
AARPRTHKITIPNLYSKLDKRTGRVYWQYKHPVTGNFHSLGTNTEEAKQVASEANDIIA
CCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EQRTRQILSVNEKIARMRESREFITVTTWLDRYLEIQQERLESGEIKINSVKQKKKPVEL
HHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
LRQCSGMLYLKDVTALEVAEIIDAVKAQGHSRMAQVVRMAIIDVFKEAQHAGHVPPGYNP
HHHHCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AQATKQPRNRVMRQRLSLDEWKTIYSAAERHPPYLQCAMLLALVTGQRIGDISNMKFSDI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCHHHH
WDDMLHVTQEKTGARLAIPLALTCVALNISLRDVVTQCRDAVLSQYLVHFRHTTSQATRG
HHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRVSPNAITTTFKKARNRSGITWPEGTAPTFHEQRSLSERLYREQGLETQKLLGHKSQKM
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHH
TDKYNDDRGKEWMVIAV
HHHCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]